Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 FDX1P2-201ENST00000450769 375 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.53□□□□□ -2.16
FOXF1Q12946 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 MTATP6P14-201ENST00000455189 673 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
FOXF1Q12946 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXF1Q12946 HMGB1P36-201ENST00000487709 576 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC108729.1-201ENST00000487812 947 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AL160314.1-201ENST00000490836 438 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC105252.1-201ENST00000503089 286 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC116353.3-201ENST00000511215 249 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXF1Q12946 AC023538.1-201ENST00000534576 736 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXF1Q12946 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.53□□□□□ -2.16
FOXF1Q12946 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 UBE2L4-201ENST00000587688 464 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.53□□□□□ -2.16
FOXF1Q12946 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.53□□□□□ -2.16
FOXF1Q12946 AL357094.1-201ENST00000603845 844 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AL592221.1-201ENST00000605266 382 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC112220.3-201ENST00000605502 502 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 OR10AB1P-201ENST00000609613 938 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.53□□□□□ -2.16
FOXF1Q12946 PCMTD1P7-201ENST00000634506 357 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 AC116618.1-201ENST00000634617 774 ntBASIC1.53□□□□□ -2.16
FOXF1Q12946 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
FOXF1Q12946 MTND4P9-201ENST00000507819 1346 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 SNORA3A-201ENST00000364113 130 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.52□□□□□ -2.17
FOXF1Q12946 MIR764-201ENST00000390811 85 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 RNU6-220P-201ENST00000390919 107 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 RNU4-22P-201ENST00000411058 166 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 NDUFS5P4-201ENST00000412983 318 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 ZNF90P2-204ENST00000419323 1075 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC083875.1-201ENST00000419509 405 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC098831.1-201ENST00000440661 216 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC020550.1-201ENST00000447385 163 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 ANKRD26P4-201ENST00000455755 950 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AP005902.1-201ENST00000521358 186 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC002545.1-201ENST00000592511 181 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AC008749.1-201ENST00000597650 306 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AL096840.1-201ENST00000603287 93 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 SNORD14A-201ENST00000606526 91 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXF1Q12946 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXF1Q12946 AC103710.2-202ENST00000641454 2853 ntBASIC1.52□□□□□ -2.17
FOXF1Q12946 AP000776.1-201ENST00000530032 1663 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 SNORD116.1-201ENST00000365628 92 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 MTCO1P17-201ENST00000411522 491 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 USP9YP33-201ENST00000412220 421 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC007919.1-201ENST00000429380 217 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.51□□□□□ -2.17
FOXF1Q12946 USP9YP35-201ENST00000435696 412 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 RSU1P2-202ENST00000437884 485 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AP000542.1-201ENST00000448473 371 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC134050.1-201ENST00000495088 933 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC098591.2-201ENST00000510152 315 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AC010587.2-201ENST00000511727 448 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXF1Q12946 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AC136618.2-201ENST00000575091 400 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 MIR5571-201ENST00000577998 113 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.51□□□□□ -2.17
FOXF1Q12946 BNIP3P27-201ENST00000599991 412 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.51□□□□□ -2.17
FOXF1Q12946 AP002791.1-201ENST00000623291 381 ntBASIC1.51□□□□□ -2.17
FOXF1Q12946 AP000676.3-201ENST00000623299 569 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms