Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMGXB3Q12766 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
HMGXB3Q12766 PRRC2CP1-201ENST00000404428 159 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 AC104629.2-201ENST00000468627 598 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 AC111193.1-201ENST00000504097 155 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HMGXB3Q12766 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 OR6C7P-201ENST00000547875 934 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.15□□□□□ -2.22
HMGXB3Q12766 AC090888.1-201ENST00000561335 1141 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 AL158032.1-201ENST00000605401 106 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 AC109454.4-201ENST00000623411 649 ntBASIC1.15□□□□□ -2.22
HMGXB3Q12766 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMGXB3Q12766 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGXB3Q12766 RNU6-1074P-201ENST00000383995 104 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 MIR147B-201ENST00000390185 80 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 AC098614.2-201ENST00000426040 255 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGXB3Q12766 AC008494.2-201ENST00000514544 370 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 SNORA31.25-201ENST00000517242 134 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 AC146944.4-201ENST00000602697 718 ntBASIC1.15□□□□□ -2.23
HMGXB3Q12766 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGXB3Q12766 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 RNU6-452P-201ENST00000384406 107 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 MTATP6P31-201ENST00000406985 692 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 RPS3AP24-201ENST00000407896 734 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 RPL23AP3-201ENST00000453844 468 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 OR52A4P-202ENST00000481634 799 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 RRN3P3-201ENST00000549207 578 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.14□□□□□ -2.23
HMGXB3Q12766 CYCSP2-201ENST00000558168 301 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGXB3Q12766 FAM60BP-201ENST00000578364 658 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 AC135507.1-201ENST00000607214 561 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGXB3Q12766 MIR6759-201ENST00000638110 65 ntBASIC1.14□□□□□ -2.23
HMGXB3Q12766 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGXB3Q12766 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGXB3Q12766 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
HMGXB3Q12766 RPL23AP32-201ENST00000395315 459 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGXB3Q12766 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGXB3Q12766 RPL23AP6-201ENST00000446637 472 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGXB3Q12766 MTND4LP3-201ENST00000468320 276 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC087884.1-201ENST00000469738 328 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 MED28P6-201ENST00000558776 231 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 MIR5571-201ENST00000577998 113 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC021749.1-201ENST00000604322 607 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC138473.1-201ENST00000605717 526 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 AC002550.2-201ENST00000621246 394 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 MIR6866-201ENST00000638146 69 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 TPTE2P4-201ENST00000258589 1605 ntBASIC1.13□□□□□ -2.23
HMGXB3Q12766 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGXB3Q12766 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
HMGXB3Q12766 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 MIR1912-201ENST00000410389 80 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC099677.1-201ENST00000420575 175 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL161651.1-201ENST00000440882 223 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC093770.1-201ENST00000511559 571 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC112198.4-201ENST00000515450 351 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL355877.2-201ENST00000603670 358 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AP006248.3-201ENST00000623580 594 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AC073544.1-201ENST00000600110 1595 ntBASIC1.12□□□□□ -2.23
HMGXB3Q12766 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 RNU6-173P-201ENST00000364215 104 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 RNU6-418P-201ENST00000384035 107 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AC019070.1-201ENST00000415008 1024 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 UBE2FP1-201ENST00000416536 447 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 MTCYBP3-201ENST00000445588 1137 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AP001960.1-201ENST00000506494 658 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AC112518.2-201ENST00000508565 425 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGXB3Q12766 AL049870.4-201ENST00000555741 486 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 HMGB1P14-201ENST00000557424 591 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 MIR4529-201ENST00000578110 78 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AC011260.1-201ENST00000578420 472 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 AC067863.3-201ENST00000624172 122 ntBASIC1.11□□□□□ -2.23
HMGXB3Q12766 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMGXB3Q12766 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMGXB3Q12766 RNU6-288P-201ENST00000363690 104 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 RNA5SP511-201ENST00000410487 115 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 AL353689.1-201ENST00000438895 199 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGXB3Q12766 HMGN1P10-201ENST00000474557 553 ntBASIC1.1□□□□□ -2.23
HMGXB3Q12766 AC021146.2-201ENST00000504736 556 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms