Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 MTND1P12-201ENST00000455231 147 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 RPS27AP10-201ENST00000496103 208 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC105252.1-201ENST00000503089 286 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC107222.1-201ENST00000510899 637 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.17□□□□□ -1.9
CALD1Q05682 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.17□□□□□ -1.9
CALD1Q05682 AP003122.4-201ENST00000530980 758 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.17□□□□□ -1.9
CALD1Q05682 MTND3P12-201ENST00000559068 328 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
CALD1Q05682 HMGN1P30-201ENST00000589286 268 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC012065.4-201ENST00000602445 679 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AL358072.1-201ENST00000604156 575 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC112191.3-201ENST00000604371 277 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AL359999.1-201ENST00000604513 294 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC138749.5-201ENST00000611461 208 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC116165.2-201ENST00000616705 206 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CALD1Q05682 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
CALD1Q05682 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CALD1Q05682 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
CALD1Q05682 SNORA67.4-201ENST00000384688 142 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 SEPT2P1-201ENST00000419651 180 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.16□□□□□ -1.9
CALD1Q05682 AC007283.2-201ENST00000424739 197 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC098826.1-201ENST00000433943 471 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 MTND4P25-201ENST00000441039 533 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 RPS15AP27-201ENST00000449183 343 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 SNORD97-201ENST00000459187 142 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.16□□□□□ -1.9
CALD1Q05682 RNA5SP337-201ENST00000517007 109 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.16□□□□□ -1.9
CALD1Q05682 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.16□□□□□ -1.9
CALD1Q05682 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.16□□□□□ -1.9
CALD1Q05682 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.16□□□□□ -1.9
CALD1Q05682 RPS3AP4-201ENST00000555161 764 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC025281.1-201ENST00000567026 265 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC107294.1-201ENST00000609524 467 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 AC099654.13-201ENST00000639774 207 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CALD1Q05682 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
CALD1Q05682 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.15□□□□□ -1.9
CALD1Q05682 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
CALD1Q05682 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CALD1Q05682 AL021407.1-201ENST00000404531 386 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL513477.1-202ENST00000417061 214 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.15□□□□□ -1.91
CALD1Q05682 AC006366.1-201ENST00000422002 759 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 ISCA1P1-201ENST00000426679 387 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.15□□□□□ -1.91
CALD1Q05682 AL592045.1-201ENST00000429867 352 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.15□□□□□ -1.91
CALD1Q05682 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.15□□□□□ -1.91
CALD1Q05682 AC133134.1-201ENST00000466800 359 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 MTND1P3-201ENST00000484956 952 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC139453.3-201ENST00000493276 369 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.15□□□□□ -1.91
CALD1Q05682 AC010587.1-201ENST00000505809 469 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC234781.5-201ENST00000508429 271 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 OR4R1P-201ENST00000529879 463 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.15□□□□□ -1.91
CALD1Q05682 AC121758.2-201ENST00000553271 193 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC027176.1-201ENST00000560204 514 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.6-201ENST00000603753 252 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.11-201ENST00000604059 253 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC008162.1-201ENST00000604718 254 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.1-201ENST00000604752 252 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.5-201ENST00000605253 252 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.12-201ENST00000605291 253 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.8-201ENST00000605353 252 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL670379.7-201ENST00000605823 252 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC103810.6-201ENST00000606708 136 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC067747.1-201ENST00000608026 250 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AL161734.1-201ENST00000609720 557 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AC009878.1-201ENST00000621819 340 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 U2.21-201ENST00000637295 81 ntBASIC3.15□□□□□ -1.91
CALD1Q05682 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.15□□□□□ -1.91
CALD1Q05682 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CALD1Q05682 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.14□□□□□ -1.91
CALD1Q05682 RNU6-778P-201ENST00000363269 103 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 RNU4-1-201ENST00000363925 141 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 RNU6-188P-201ENST00000364207 107 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 RNU5E-6P-201ENST00000365574 115 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 RNU1-73P-201ENST00000383971 164 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 BPY2DP-201ENST00000422208 265 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 AC092447.3-201ENST00000426027 686 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.14□□□□□ -1.91
CALD1Q05682 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.14□□□□□ -1.91
CALD1Q05682 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.14□□□□□ -1.91
CALD1Q05682 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.14□□□□□ -1.91
CALD1Q05682 SUB1P1-201ENST00000524415 382 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 AC022878.1-201ENST00000530684 149 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 RNU6-87P-201ENST00000607561 108 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 AC013562.2-201ENST00000611632 603 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.14□□□□□ -1.91
CALD1Q05682 AL359693.1-201ENST00000614959 2407 ntBASIC3.14□□□□□ -1.91
CALD1Q05682 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms