Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
XPCQ01831 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 MIR369-201ENST00000362155 70 ntBASIC5.06□□□□□ -1.6
XPCQ01831 RNU4-35P-201ENST00000362588 141 ntBASIC5.06□□□□□ -1.6
XPCQ01831 RNU6-562P-201ENST00000362731 107 ntBASIC5.06□□□□□ -1.6
XPCQ01831 SNORA38.1-201ENST00000364172 131 ntBASIC5.06□□□□□ -1.6
XPCQ01831 SNORA4.3-201ENST00000365564 137 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 MTCYBP4-201ENST00000401524 249 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AL592045.1-201ENST00000429867 352 ntBASIC5.06□□□□□ -1.6
XPCQ01831 SNAP23P1-201ENST00000433229 246 ntBASIC5.06□□□□□ -1.6
XPCQ01831 RNU7-152P-201ENST00000458982 64 ntBASIC5.06□□□□□ -1.6
XPCQ01831 RPS15AP34-201ENST00000487776 387 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AC096576.1-201ENST00000489014 359 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.06□□□□□ -1.6
XPCQ01831 SCARNA15.2-201ENST00000516409 127 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.06□□□□□ -1.6
XPCQ01831 MIR3921-201ENST00000577308 85 ntBASIC5.06□□□□□ -1.6
XPCQ01831 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 AC073539.2-201ENST00000597113 165 ntBASIC5.06□□□□□ -1.6
XPCQ01831 MIR7112-201ENST00000616126 65 ntBASIC5.06□□□□□ -1.6
XPCQ01831 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.06□□□□□ -1.6
XPCQ01831 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XPCQ01831 AC018555.1-201ENST00000567548 1980 ntBASIC5.05□□□□□ -1.6
XPCQ01831 MTND4P27-201ENST00000450813 1354 ntBASIC5.05□□□□□ -1.6
XPCQ01831 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
XPCQ01831 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.05□□□□□ -1.6
XPCQ01831 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
XPCQ01831 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
XPCQ01831 Y_RNA.128-201ENST00000363391 112 ntBASIC5.05□□□□□ -1.6
XPCQ01831 RNU6-512P-201ENST00000364438 103 ntBASIC5.05□□□□□ -1.6
XPCQ01831 RNU6-128P-201ENST00000383976 107 ntBASIC5.05□□□□□ -1.6
XPCQ01831 Y_RNA.482-201ENST00000384377 111 ntBASIC5.05□□□□□ -1.6
XPCQ01831 MIR548P-201ENST00000408336 84 ntBASIC5.05□□□□□ -1.6
XPCQ01831 RNA5SP306-201ENST00000411087 107 ntBASIC5.05□□□□□ -1.6
XPCQ01831 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.05□□□□□ -1.6
XPCQ01831 AC063979.1-201ENST00000415539 377 ntBASIC5.05□□□□□ -1.6
XPCQ01831 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.05□□□□□ -1.6
XPCQ01831 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.05□□□□□ -1.6
XPCQ01831 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.05□□□□□ -1.6
XPCQ01831 Y_RNA.639-201ENST00000458981 102 ntBASIC5.05□□□□□ -1.6
XPCQ01831 RN7SL807P-201ENST00000470923 297 ntBASIC5.05□□□□□ -1.6
XPCQ01831 SUMO2P6-201ENST00000505273 288 ntBASIC5.05□□□□□ -1.6
XPCQ01831 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
XPCQ01831 AL359273.1-201ENST00000510918 627 ntBASIC5.05□□□□□ -1.6
XPCQ01831 RNU6-1332P-201ENST00000516666 104 ntBASIC5.05□□□□□ -1.6
XPCQ01831 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.05□□□□□ -1.6
XPCQ01831 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.05□□□□□ -1.6
XPCQ01831 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.05□□□□□ -1.6
XPCQ01831 AC098826.3-201ENST00000603823 466 ntBASIC5.05□□□□□ -1.6
XPCQ01831 AC012603.1-201ENST00000606424 528 ntBASIC5.05□□□□□ -1.6
XPCQ01831 Z99571.1-201ENST00000636677 394 ntBASIC5.05□□□□□ -1.6
XPCQ01831 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
XPCQ01831 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XPCQ01831 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
XPCQ01831 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.04□□□□□ -1.6
XPCQ01831 RNU6-1167P-201ENST00000363227 94 ntBASIC5.04□□□□□ -1.6
XPCQ01831 RNU6-1303P-201ENST00000364841 107 ntBASIC5.04□□□□□ -1.6
XPCQ01831 RNU6-474P-201ENST00000384243 107 ntBASIC5.04□□□□□ -1.6
XPCQ01831 Y_RNA.500-201ENST00000384466 111 ntBASIC5.04□□□□□ -1.6
XPCQ01831 MIR578-201ENST00000384828 96 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.04□□□□□ -1.6
XPCQ01831 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.04□□□□□ -1.6
XPCQ01831 AL360271.2-201ENST00000447710 161 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.04□□□□□ -1.6
XPCQ01831 RPL7P5-201ENST00000471472 736 ntBASIC5.04□□□□□ -1.6
XPCQ01831 HMGN1P10-201ENST00000474557 553 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AC078817.1-201ENST00000492623 435 ntBASIC5.04□□□□□ -1.6
XPCQ01831 SNORA31.8-201ENST00000516327 108 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AC090281.1-201ENST00000523019 276 ntBASIC5.04□□□□□ -1.6
XPCQ01831 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.04□□□□□ -1.6
XPCQ01831 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.04□□□□□ -1.6
XPCQ01831 MIR548AC-201ENST00000585049 88 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.04□□□□□ -1.6
XPCQ01831 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.04□□□□□ -1.6
XPCQ01831 AC002044.1-201ENST00000606707 158 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AC107294.1-201ENST00000609524 467 ntBASIC5.04□□□□□ -1.6
XPCQ01831 AL512643.1-201ENST00000635735 524 ntBASIC5.04□□□□□ -1.6
XPCQ01831 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
XPCQ01831 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
XPCQ01831 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
XPCQ01831 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XPCQ01831 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XPCQ01831 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XPCQ01831 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.04□□□□□ -1.6
XPCQ01831 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
XPCQ01831 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XPCQ01831 RNU6-1188P-201ENST00000363795 107 ntBASIC5.03□□□□□ -1.6
XPCQ01831 SNORA7.2-201ENST00000364446 145 ntBASIC5.03□□□□□ -1.6
XPCQ01831 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
XPCQ01831 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms