Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
IRF9Q00978 SCARNA16.2-201ENST00000516520 172 ntBASIC3.95□□□□□ -1.78
IRF9Q00978 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.95□□□□□ -1.78
IRF9Q00978 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.95□□□□□ -1.78
IRF9Q00978 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.95□□□□□ -1.78
IRF9Q00978 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.95□□□□□ -1.78
IRF9Q00978 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.95□□□□□ -1.78
IRF9Q00978 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.95□□□□□ -1.78
IRF9Q00978 AL645944.1-201ENST00000603857 493 ntBASIC3.95□□□□□ -1.78
IRF9Q00978 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.95□□□□□ -1.78
IRF9Q00978 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.95□□□□□ -1.78
IRF9Q00978 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
IRF9Q00978 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
IRF9Q00978 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
IRF9Q00978 MTND5P30-201ENST00000452896 1731 ntBASIC3.95□□□□□ -1.78
IRF9Q00978 IPO8P1-201ENST00000455509 3109 ntBASIC3.95□□□□□ -1.78
IRF9Q00978 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.95□□□□□ -1.78
IRF9Q00978 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
IRF9Q00978 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
IRF9Q00978 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
IRF9Q00978 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-37P-201ENST00000362692 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 Y_RNA.148-201ENST00000363557 117 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-11P-201ENST00000364234 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-7-201ENST00000364784 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-8-201ENST00000365467 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 DEFB109C-201ENST00000382575 264 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 DEFB109B-201ENST00000382656 264 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-25P-201ENST00000383873 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-1-201ENST00000383898 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-48P-201ENST00000384161 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-36P-201ENST00000384172 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-4P-201ENST00000384205 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-5P-201ENST00000384238 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 Y_RNA.463-201ENST00000384271 102 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-3P-201ENST00000384314 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-16P-201ENST00000384385 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-15P-201ENST00000384534 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU1-89P-201ENST00000384592 164 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-2-201ENST00000384627 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-29P-201ENST00000384637 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-9-201ENST00000384776 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-33P-201ENST00000384793 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 MIR10A-201ENST00000385043 110 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 PPIAP31-201ENST00000405422 495 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 MIR1251-201ENST00000408552 70 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 U3.42-201ENST00000408746 214 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 CRYBB2P1-203ENST00000415709 538 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 SYF2P2-201ENST00000417620 583 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 PGBD4P6-201ENST00000421501 610 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.94□□□□□ -1.78
IRF9Q00978 AC018865.2-201ENST00000423631 129 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AC007560.1-201ENST00000426912 237 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RPL21P104-201ENST00000464143 478 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.94□□□□□ -1.78
IRF9Q00978 AC113155.1-201ENST00000511141 769 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.94□□□□□ -1.78
IRF9Q00978 RNA5SP384-201ENST00000516615 116 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-572P-201ENST00000516724 80 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-307P-201ENST00000516743 106 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNA5SP143-201ENST00000516936 115 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.94□□□□□ -1.78
IRF9Q00978 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.94□□□□□ -1.78
IRF9Q00978 AC109446.1-201ENST00000566172 220 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AP000787.2-201ENST00000604432 568 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AP001836.1-201ENST00000604675 523 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AL121917.1-203ENST00000605534 577 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 RNU6-6P-201ENST00000606623 107 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 MIR486-1-201ENST00000612171 68 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AC099506.2-201ENST00000623074 221 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 Z69720.2-201ENST00000624755 279 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.94□□□□□ -1.78
IRF9Q00978 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
IRF9Q00978 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
IRF9Q00978 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.94□□□□□ -1.78
IRF9Q00978 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
IRF9Q00978 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
IRF9Q00978 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
IRF9Q00978 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
IRF9Q00978 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
IRF9Q00978 SNORA60-201ENST00000362396 134 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 SNORA70.2-201ENST00000364506 135 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 AC068538.1-201ENST00000376856 336 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 RNU6-842P-201ENST00000384269 107 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 RNU6-166P-201ENST00000384371 107 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 RNU6-331P-201ENST00000384724 107 ntBASIC3.93□□□□□ -1.78
IRF9Q00978 RNA5SP239-201ENST00000410218 129 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms