Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RPL23AP42-201ENST00000471152 471 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC026801.1-201ENST00000497178 464 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.48□□□□□ -2.17
HOXC5Q00444 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.48□□□□□ -2.17
HOXC5Q00444 MTCO3P27-201ENST00000514397 196 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 SNORD19.2-201ENST00000516978 73 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.48□□□□□ -2.17
HOXC5Q00444 AC022880.1-201ENST00000534017 973 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC5Q00444 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 MIR3912-201ENST00000577566 105 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 MIR4529-201ENST00000578110 78 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 UBE2L4-201ENST00000587688 464 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC021171.1-201ENST00000603137 706 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 MTCYBP22-201ENST00000603788 447 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AL355297.2-201ENST00000604792 129 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC023158.2-201ENST00000614876 543 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.48□□□□□ -2.17
HOXC5Q00444 U4atac.1-201ENST00000618345 95 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC079416.3-201ENST00000624479 549 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HOXC5Q00444 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
HOXC5Q00444 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HOXC5Q00444 Y_RNA.578-201ENST00000390903 88 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC5Q00444 RNU2-63P-201ENST00000410792 194 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC5Q00444 XKRYP1-201ENST00000423438 492 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 PTGES3P4-201ENST00000426243 356 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC5Q00444 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC5Q00444 XKRYP2-201ENST00000432915 492 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 NANOGP2-201ENST00000435391 727 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC5Q00444 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC5Q00444 MTND1P9-201ENST00000453775 944 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC013267.1-201ENST00000458227 267 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 CKS1BP2-201ENST00000497342 240 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC104685.1-201ENST00000502445 371 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC116337.1-201ENST00000509680 687 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HOXC5Q00444 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.47□□□□□ -2.17
HOXC5Q00444 MRPS33P3-201ENST00000513456 322 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 SNORA4.4-201ENST00000515921 135 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 RNU6-927P-201ENST00000516199 100 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 RNU6-581P-201ENST00000516214 105 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AP003355.1-201ENST00000518956 587 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC107953.1-201ENST00000522216 297 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC5Q00444 EEF1A1P37-201ENST00000522748 715 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 DEFB130C-202ENST00000530001 230 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC5Q00444 AC090079.2-201ENST00000575289 768 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC098826.3-201ENST00000603823 466 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 AC009237.15-201ENST00000610252 501 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 uc_338.14-201ENST00000613162 166 ntBASIC1.47□□□□□ -2.17
HOXC5Q00444 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
HOXC5Q00444 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HOXC5Q00444 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXC5Q00444 ZNF876P-202ENST00000398732 1485 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 RNU6-236P-201ENST00000363886 106 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 snoZ40.1-201ENST00000364540 72 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 RNU6-744P-201ENST00000365557 107 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 RNU6-1316P-201ENST00000384242 108 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AL139397.2-201ENST00000404529 772 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AC020550.1-201ENST00000447385 163 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AC092001.1-201ENST00000453012 261 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 USP9YP10-201ENST00000454868 628 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AC139453.3-201ENST00000493276 369 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXC5Q00444 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXC5Q00444 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AP003049.1-201ENST00000529418 457 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXC5Q00444 AC078899.2-201ENST00000595282 212 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AL109918.3-201ENST00000603072 338 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 AL161798.1-201ENST00000604630 131 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXC5Q00444 Z75746.1-201ENST00000440243 2080 ntBASIC1.46□□□□□ -2.18
HOXC5Q00444 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC5Q00444 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC5Q00444 AL079343.1-201ENST00000572358 1771 ntBASIC1.45□□□□□ -2.18
HOXC5Q00444 UBE2L2-201ENST00000254302 429 ntBASIC1.45□□□□□ -2.18
HOXC5Q00444 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC5Q00444 RNU1-72P-201ENST00000362976 153 ntBASIC1.45□□□□□ -2.18
HOXC5Q00444 RNU6-289P-201ENST00000364093 107 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms