Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NDUFS5P4-201ENST00000412983 318 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 HSPE1P1-201ENST00000421494 318 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AL669831.1-202ENST00000428504 417 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CL1P78423 GTF2IP13-201ENST00000438487 386 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 SEPT14P3-201ENST00000439401 183 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AL732372.2-207ENST00000445840 183 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CL1P78423 SEPT14P2-201ENST00000453405 183 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 SNORA84-201ENST00000459229 133 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 FTH1P2-201ENST00000466086 412 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC025518.1-201ENST00000479856 347 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC114786.4-201ENST00000508771 728 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 SEPT14P4-201ENST00000513445 186 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AC010265.1-201ENST00000513509 211 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.73□□□□□ -1.97
CX3CL1P78423 SNORA67.7-201ENST00000516664 135 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 MTND4LP26-201ENST00000518144 282 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC104027.1-201ENST00000521887 300 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 FO082796.1-201ENST00000523795 183 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 SUB1P1-201ENST00000524415 382 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CL1P78423 MIR3158-1-201ENST00000583596 81 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AC107304.1-201ENST00000604229 296 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 AL161629.2-201ENST00000615347 275 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CX3CL1P78423 MIR3688-2-201ENST00000636963 87 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CL1P78423 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.72□□□□□ -1.97
CX3CL1P78423 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 MIR148B-201ENST00000362252 99 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 RNU4-35P-201ENST00000362588 141 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 RNU6-166P-201ENST00000384371 107 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 SNORD37.1-201ENST00000390968 65 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AL606923.1-201ENST00000406616 190 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 RPL21P90-201ENST00000415692 466 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 RPL21P40-201ENST00000428586 483 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 HMGN2P31-201ENST00000432430 273 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 MTATP6P7-201ENST00000453315 681 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 SCARNA18-201ENST00000459004 134 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 MTAPP1-201ENST00000489154 819 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 RNU6-1178P-201ENST00000516674 107 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AL137161.1-201ENST00000532231 390 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CL1P78423 AC015917.1-201ENST00000579654 510 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 MIR3922-201ENST00000585192 84 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AC073539.2-201ENST00000597113 165 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AC245389.1-201ENST00000605141 529 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 U3.45-201ENST00000607547 219 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 U6atac.1-201ENST00000616025 117 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 AC006133.1-201ENST00000617106 264 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 FER-210ENST00000628534 558 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CL1P78423 U6.99-201ENST00000637524 83 ntBASIC2.72□□□□□ -1.97
CX3CL1P78423 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CX3CL1P78423 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CL1P78423 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CL1P78423 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AL079305.1-201ENST00000623159 3008 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 Y_RNA.38-201ENST00000362617 102 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 SNORD56.3-201ENST00000363507 71 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 Y_RNA.256-201ENST00000364594 104 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU6-1179P-201ENST00000384667 107 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CX3CL1P78423 SNORD17-201ENST00000390930 237 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 SNORA48.8-201ENST00000391324 134 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RN7SKP111-201ENST00000410349 271 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU6-1068P-201ENST00000410958 103 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 RNU6-193P-201ENST00000410977 107 ntBASIC2.71□□□□□ -1.98
CX3CL1P78423 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CL1P78423 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CX3CL1P78423 BPY2DP-201ENST00000422208 265 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms