Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MTCO2P15-201ENST00000532655 656 ntBASIC2.3□□□□□ -2.04
CCNA1P78396 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.3□□□□□ -2.04
CCNA1P78396 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.3□□□□□ -2.04
CCNA1P78396 BNIP3P26-201ENST00000600827 554 ntBASIC2.3□□□□□ -2.04
CCNA1P78396 AC090186.1-201ENST00000605991 572 ntBASIC2.3□□□□□ -2.04
CCNA1P78396 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.3□□□□□ -2.04
CCNA1P78396 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCNA1P78396 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCNA1P78396 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
CCNA1P78396 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 RNU6-413P-201ENST00000384115 107 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.29□□□□□ -2.04
CCNA1P78396 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.29□□□□□ -2.04
CCNA1P78396 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.29□□□□□ -2.04
CCNA1P78396 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AL953862.1-201ENST00000423016 168 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 PTGES3P4-201ENST00000426243 356 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AC244035.1-201ENST00000430042 390 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 GPM6BP2-201ENST00000432046 144 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AC004383.1-201ENST00000438135 289 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.29□□□□□ -2.04
CCNA1P78396 GPM6BP1-201ENST00000446387 144 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CCNA1P78396 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.29□□□□□ -2.04
CCNA1P78396 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.29□□□□□ -2.04
CCNA1P78396 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.29□□□□□ -2.04
CCNA1P78396 AF213884.2-201ENST00000510417 903 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.29□□□□□ -2.04
CCNA1P78396 AC006199.1-201ENST00000548728 219 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.29□□□□□ -2.04
CCNA1P78396 AC110588.1-201ENST00000559699 137 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.29□□□□□ -2.04
CCNA1P78396 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 RPP40P2-201ENST00000603596 712 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 MTCYBP22-201ENST00000603788 447 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 MTND3P19-201ENST00000603825 345 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 AC244517.12-201ENST00000623581 663 ntBASIC2.29□□□□□ -2.04
CCNA1P78396 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
CCNA1P78396 MTND4P9-201ENST00000507819 1346 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.28□□□□□ -2.04
CCNA1P78396 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.28□□□□□ -2.04
CCNA1P78396 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 MIR122-201ENST00000385044 85 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 MIR1302-8-201ENST00000408342 128 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.28□□□□□ -2.04
CCNA1P78396 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.28□□□□□ -2.04
CCNA1P78396 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.28□□□□□ -2.04
CCNA1P78396 AL353729.1-201ENST00000425044 720 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.28□□□□□ -2.04
CCNA1P78396 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCNA1P78396 MEMO1P3-201ENST00000459811 302 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 FAM92A1P2-202ENST00000504766 877 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.28□□□□□ -2.04
CCNA1P78396 AC093809.1-201ENST00000509155 340 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.28□□□□□ -2.04
CCNA1P78396 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AK6P1-201ENST00000540219 478 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.28□□□□□ -2.04
CCNA1P78396 AC091152.3-201ENST00000604227 325 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC004908.2-201ENST00000609090 574 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC131235.4-201ENST00000609288 620 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AP001486.3-201ENST00000615334 372 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AC024581.2-201ENST00000619986 252 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 YWHAEP7-203ENST00000622054 312 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 AL031601.2-202ENST00000622650 282 ntBASIC2.28□□□□□ -2.04
CCNA1P78396 RNA5SP240-201ENST00000365355 128 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 MIR620-201ENST00000385232 95 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 RNA5SP213-201ENST00000391031 106 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AL021407.1-201ENST00000404531 386 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 U3.40-201ENST00000408706 208 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 USP9YP6-201ENST00000413550 854 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 RPL21P24-201ENST00000413752 448 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 RPS3AP37-201ENST00000419176 745 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.27□□□□□ -2.05
CCNA1P78396 USP9YP11-201ENST00000427537 717 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC027124.2-201ENST00000428249 105 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 EEF1A1P39-201ENST00000440791 250 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.27□□□□□ -2.05
CCNA1P78396 FCF1P6-201ENST00000456841 595 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.27□□□□□ -2.05
CCNA1P78396 MTND1P16-201ENST00000465177 898 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 HMGB1P36-201ENST00000487709 576 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC034222.1-201ENST00000494052 532 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.27□□□□□ -2.05
CCNA1P78396 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.27□□□□□ -2.05
CCNA1P78396 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCNA1P78396 OR11H5P-201ENST00000554039 926 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCNA1P78396 MTCYBP23-201ENST00000558717 1102 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC023813.2-201ENST00000564321 469 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.27□□□□□ -2.05
CCNA1P78396 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.27□□□□□ -2.05
CCNA1P78396 MIR4529-201ENST00000578110 78 ntBASIC2.27□□□□□ -2.05
CCNA1P78396 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms