Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-707P-201ENST00000364647 95 ntBASIC1.69□□□□□ -2.14
TPM4P67936 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TPM4P67936 MTND2P20-201ENST00000440805 661 ntBASIC1.69□□□□□ -2.14
TPM4P67936 MTND2P3-201ENST00000452458 470 ntBASIC1.69□□□□□ -2.14
TPM4P67936 USP9YP10-201ENST00000454868 628 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AL441985.1-201ENST00000457727 251 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AC027575.1-201ENST00000481064 460 ntBASIC1.69□□□□□ -2.14
TPM4P67936 SNORA48.9-201ENST00000516419 162 ntBASIC1.69□□□□□ -2.14
TPM4P67936 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
TPM4P67936 NDUFA5P6-201ENST00000542110 379 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AC079598.5-201ENST00000547460 117 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AC012213.3-201ENST00000577199 777 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AC069304.2-201ENST00000605154 435 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AC092953.2-201ENST00000608000 699 ntBASIC1.69□□□□□ -2.14
TPM4P67936 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
TPM4P67936 AL118508.4-201ENST00000624142 1176 ntBASIC1.69□□□□□ -2.14
TPM4P67936 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TPM4P67936 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
TPM4P67936 CDC27P3-201ENST00000635418 1910 ntBASIC1.68□□□□□ -2.14
TPM4P67936 RNU6-223P-201ENST00000362830 107 ntBASIC1.68□□□□□ -2.14
TPM4P67936 RNU6-1167P-201ENST00000363227 94 ntBASIC1.68□□□□□ -2.14
TPM4P67936 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
TPM4P67936 RNU6-955P-201ENST00000410497 104 ntBASIC1.68□□□□□ -2.14
TPM4P67936 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AL353621.1-201ENST00000418219 243 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AL353706.1-201ENST00000436728 494 ntBASIC1.68□□□□□ -2.14
TPM4P67936 COX7BP2-201ENST00000437976 242 ntBASIC1.68□□□□□ -2.14
TPM4P67936 ARPC3P5-201ENST00000448802 534 ntBASIC1.68□□□□□ -2.14
TPM4P67936 BX322784.1-201ENST00000455793 1077 ntBASIC1.68□□□□□ -2.14
TPM4P67936 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM4P67936 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AC021382.1-201ENST00000483523 359 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AC140059.1-201ENST00000489238 361 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.68□□□□□ -2.14
TPM4P67936 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM4P67936 AP004607.1-201ENST00000524456 203 ntBASIC1.68□□□□□ -2.14
TPM4P67936 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM4P67936 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TPM4P67936 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.68□□□□□ -2.14
TPM4P67936 AF038458.1-201ENST00000588406 262 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AC073544.2-201ENST00000601155 540 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AL713866.2-201ENST00000603579 219 ntBASIC1.68□□□□□ -2.14
TPM4P67936 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
TPM4P67936 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.68□□□□□ -2.14
TPM4P67936 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM4P67936 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.68□□□□□ -2.14
TPM4P67936 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
TPM4P67936 RNU1-62P-201ENST00000362599 164 ntBASIC1.67□□□□□ -2.14
TPM4P67936 RNU6-114P-201ENST00000384704 105 ntBASIC1.67□□□□□ -2.14
TPM4P67936 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
TPM4P67936 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TPM4P67936 AC078974.1-201ENST00000411597 223 ntBASIC1.67□□□□□ -2.14
TPM4P67936 USP9YP6-201ENST00000413550 854 ntBASIC1.67□□□□□ -2.14
TPM4P67936 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.67□□□□□ -2.14
TPM4P67936 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.67□□□□□ -2.14
TPM4P67936 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.67□□□□□ -2.14
TPM4P67936 MTCO3P43-201ENST00000440974 771 ntBASIC1.67□□□□□ -2.14
TPM4P67936 AL158053.1-201ENST00000441503 453 ntBASIC1.67□□□□□ -2.14
TPM4P67936 SSXP1-201ENST00000453640 473 ntBASIC1.67□□□□□ -2.14
TPM4P67936 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.67□□□□□ -2.14
TPM4P67936 TPRKBP1-201ENST00000456243 481 ntBASIC1.67□□□□□ -2.14
TPM4P67936 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
TPM4P67936 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
TPM4P67936 DUXAP5-201ENST00000529668 529 ntBASIC1.67□□□□□ -2.14
TPM4P67936 CYB5AP5-201ENST00000549779 389 ntBASIC1.67□□□□□ -2.14
TPM4P67936 HIGD1AP17-201ENST00000554576 276 ntBASIC1.67□□□□□ -2.14
TPM4P67936 AC074050.1-201ENST00000563247 211 ntBASIC1.67□□□□□ -2.14
TPM4P67936 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
TPM4P67936 AL161798.1-201ENST00000604630 131 ntBASIC1.67□□□□□ -2.14
TPM4P67936 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
TPM4P67936 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TPM4P67936 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
TPM4P67936 RNU6-1207P-201ENST00000384343 107 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL591034.2-201ENST00000402839 359 ntBASIC1.66□□□□□ -2.14
TPM4P67936 MIR1302-8-201ENST00000408342 128 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM4P67936 AL035407.1-201ENST00000429211 571 ntBASIC1.66□□□□□ -2.14
TPM4P67936 USP9YP24-201ENST00000434374 697 ntBASIC1.66□□□□□ -2.14
TPM4P67936 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM4P67936 AC020550.1-201ENST00000447385 163 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL137159.1-201ENST00000452808 512 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM4P67936 AMD1P1-201ENST00000457220 922 ntBASIC1.66□□□□□ -2.14
TPM4P67936 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM4P67936 AC110760.3-202ENST00000515177 371 ntBASIC1.66□□□□□ -2.14
TPM4P67936 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
TPM4P67936 AP005597.4-201ENST00000526762 229 ntBASIC1.66□□□□□ -2.14
TPM4P67936 ARL2BPP2-201ENST00000550907 489 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM4P67936 MTCYBP23-201ENST00000558717 1102 ntBASIC1.66□□□□□ -2.14
TPM4P67936 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM4P67936 AL353997.4-201ENST00000586196 166 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM4P67936 AC026741.1-201ENST00000605892 482 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM4P67936 AC003001.2-201ENST00000616294 831 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AC092192.1-201ENST00000633154 1018 ntBASIC1.66□□□□□ -2.14
TPM4P67936 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM4P67936 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TPM4P67936 CDR1-202ENST00000625883 1485 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms