Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.67□□□□□ -1.98
LMO4P61968 MTCO2P12-201ENST00000427426 682 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MTATP6P16-201ENST00000434543 526 ntBASIC2.67□□□□□ -1.98
LMO4P61968 SNRPEP4-201ENST00000435815 279 ntBASIC2.67□□□□□ -1.98
LMO4P61968 IFNA20P-201ENST00000436840 528 ntBASIC2.67□□□□□ -1.98
LMO4P61968 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 MTND3P16-201ENST00000452205 344 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC108059.3-201ENST00000456388 214 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 RPS29P15-201ENST00000458329 171 ntBASIC2.67□□□□□ -1.98
LMO4P61968 SNORD121B-201ENST00000458838 81 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LMO4P61968 AL359273.1-201ENST00000510918 627 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.67□□□□□ -1.98
LMO4P61968 AC114797.1-201ENST00000514003 728 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.67□□□□□ -1.98
LMO4P61968 RNU4-29P-201ENST00000515943 174 ntBASIC2.67□□□□□ -1.98
LMO4P61968 SNORA19.2-201ENST00000516013 114 ntBASIC2.67□□□□□ -1.98
LMO4P61968 SCARNA13-201ENST00000516672 275 ntBASIC2.67□□□□□ -1.98
LMO4P61968 ERHP1-201ENST00000523006 310 ntBASIC2.67□□□□□ -1.98
LMO4P61968 FAM60DP-201ENST00000524174 632 ntBASIC2.67□□□□□ -1.98
LMO4P61968 DEFB108D-201ENST00000527787 222 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AC128657.1-201ENST00000549459 145 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AC005668.1-201ENST00000571142 476 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MIR4474-201ENST00000579189 78 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.67□□□□□ -1.98
LMO4P61968 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 AC110741.2-201ENST00000605278 268 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC008962.1-201ENST00000605729 304 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC093913.1-201ENST00000614178 329 ntBASIC2.67□□□□□ -1.98
LMO4P61968 MIR6130-201ENST00000619419 109 ntBASIC2.67□□□□□ -1.98
LMO4P61968 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.67□□□□□ -1.98
LMO4P61968 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.67□□□□□ -1.98
LMO4P61968 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.67□□□□□ -1.98
LMO4P61968 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.67□□□□□ -1.98
LMO4P61968 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.67□□□□□ -1.98
LMO4P61968 AC090740.1-201ENST00000623193 2262 ntBASIC2.67□□□□□ -1.98
LMO4P61968 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.67□□□□□ -1.98
LMO4P61968 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LMO4P61968 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
LMO4P61968 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 RNU6-511P-201ENST00000363496 107 ntBASIC2.66□□□□□ -1.98
LMO4P61968 SNORA62.1-201ENST00000364287 154 ntBASIC2.66□□□□□ -1.98
LMO4P61968 U3.11-201ENST00000364476 212 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RNU6-1078P-201ENST00000364522 103 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
LMO4P61968 SNORA7.4-201ENST00000384249 137 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MIR634-201ENST00000385208 97 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MIR493-201ENST00000385254 89 ntBASIC2.66□□□□□ -1.98
LMO4P61968 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LMO4P61968 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 MIR1290-201ENST00000408735 78 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RNU2-62P-201ENST00000410868 191 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC018630.2-202ENST00000422992 927 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 MTATP6P4-201ENST00000427725 675 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MED13P1-201ENST00000428342 171 ntBASIC2.66□□□□□ -1.98
LMO4P61968 SAR1AP4-201ENST00000429225 591 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RPL23AP69-201ENST00000431134 458 ntBASIC2.66□□□□□ -1.98
LMO4P61968 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 ERLEC1P1-201ENST00000433806 578 ntBASIC2.66□□□□□ -1.98
LMO4P61968 NDUFA5P4-201ENST00000436704 385 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.66□□□□□ -1.98
LMO4P61968 HMGB1P18-201ENST00000438801 619 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 Y_RNA.632-201ENST00000459189 102 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC105417.1-201ENST00000514691 285 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.66□□□□□ -1.98
LMO4P61968 Y_RNA.665-201ENST00000516177 98 ntBASIC2.66□□□□□ -1.98
LMO4P61968 Y_RNA.691-201ENST00000516611 103 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RN7SKP219-201ENST00000516825 296 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MIR2276-201ENST00000516886 89 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RNU6-798P-201ENST00000516912 103 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 AP005597.4-201ENST00000526762 229 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AP005435.4-201ENST00000529514 284 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.66□□□□□ -1.98
LMO4P61968 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 BNIP3P6-201ENST00000549284 499 ntBASIC2.66□□□□□ -1.98
LMO4P61968 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.66□□□□□ -1.98
LMO4P61968 PSMA3P-201ENST00000555485 635 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.66□□□□□ -1.98
LMO4P61968 RNU6-89P-201ENST00000606519 100 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC068831.7-201ENST00000616954 363 ntBASIC2.66□□□□□ -1.98
LMO4P61968 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO4P61968 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMO4P61968 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.66□□□□□ -1.98
LMO4P61968 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms