Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SEC61A1P61619 Y_RNA.301-201ENST00000364990 103 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 RNU6-190P-201ENST00000384154 102 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 RNU6-1127P-201ENST00000384580 107 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 MIR493-201ENST00000385254 89 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 RNA5SP219-201ENST00000390940 113 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.09□□□□□ -1.91
SEC61A1P61619 MTHFD2P2-201ENST00000407725 247 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 POLHP1-201ENST00000411806 470 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 RPL27AP8-201ENST00000424277 446 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 NDUFB1P1-201ENST00000435191 180 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.09□□□□□ -1.91
SEC61A1P61619 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 AL358232.1-201ENST00000448030 501 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 AP001086.1-201ENST00000494882 321 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 Y_RNA.654-201ENST00000497848 106 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 Y_RNA.682-201ENST00000516457 100 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 RNU6-1088P-201ENST00000516850 104 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.09□□□□□ -1.91
SEC61A1P61619 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A1P61619 SNORA51-201ENST00000606420 132 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.09□□□□□ -1.91
SEC61A1P61619 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.09□□□□□ -1.91
SEC61A1P61619 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 MTND5P27-201ENST00000428871 1720 ntBASIC3.09□□□□□ -1.91
SEC61A1P61619 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SEC61A1P61619 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SEC61A1P61619 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.08□□□□□ -1.92
SEC61A1P61619 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 Y_RNA.530-201ENST00000384587 101 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SEC61A1P61619 SNORD70.1-201ENST00000391007 85 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 HSPE1P26-201ENST00000405341 275 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 RNU2-37P-201ENST00000410695 177 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 RN7SKP140-201ENST00000411196 284 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 RNU2-71P-201ENST00000411395 189 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC126124.2-201ENST00000413542 321 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC093578.1-201ENST00000415219 368 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AL354751.2-201ENST00000415471 210 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 UBE2D3P2-201ENST00000424409 445 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AL451062.2-201ENST00000427515 271 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.08□□□□□ -1.92
SEC61A1P61619 HMGN2P31-201ENST00000432430 273 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 RPL7P43-201ENST00000478876 753 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 RNU6-1256P-201ENST00000516539 103 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 Y_RNA.691-201ENST00000516611 103 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 RNU6-579P-201ENST00000516879 102 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 SYF2P1-201ENST00000550658 413 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AL355836.1-201ENST00000555951 870 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC106782.4-201ENST00000568264 210 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 MIR3922-201ENST00000585192 84 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A1P61619 AL138889.2-201ENST00000603883 242 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC104763.2-201ENST00000604179 382 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AL365204.3-201ENST00000612448 685 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 AL160413.1-201ENST00000622780 310 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 HSPA8P4-201ENST00000511877 1920 ntBASIC3.08□□□□□ -1.92
SEC61A1P61619 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A1P61619 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
SEC61A1P61619 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A1P61619 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SEC61A1P61619 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A1P61619 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SEC61A1P61619 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEC61A1P61619 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SEC61A1P61619 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEC61A1P61619 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
SEC61A1P61619 Y_RNA.138-201ENST00000363462 102 ntBASIC3.07□□□□□ -1.92
SEC61A1P61619 RNA5SP42-201ENST00000364278 115 ntBASIC3.07□□□□□ -1.92
SEC61A1P61619 U3.12-201ENST00000364498 214 ntBASIC3.07□□□□□ -1.92
SEC61A1P61619 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms