Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR4672-201ENST00000583126 81 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC009977.1-201ENST00000586015 570 ntBASIC2.32□□□□□ -2.04
LIM2P55344 BNIP3P8-201ENST00000597863 560 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC007621.1-201ENST00000604544 437 ntBASIC2.32□□□□□ -2.04
LIM2P55344 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.32□□□□□ -2.04
LIM2P55344 AL603839.4-201ENST00000624658 1005 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.32□□□□□ -2.04
LIM2P55344 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LIM2P55344 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
LIM2P55344 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
LIM2P55344 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 FGF7P2-201ENST00000332473 296 ntBASIC2.31□□□□□ -2.04
LIM2P55344 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.31□□□□□ -2.04
LIM2P55344 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 Y_RNA.111-201ENST00000363248 100 ntBASIC2.31□□□□□ -2.04
LIM2P55344 SMIM11P1-201ENST00000369586 178 ntBASIC2.31□□□□□ -2.04
LIM2P55344 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 MIR301A-201ENST00000385261 86 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
LIM2P55344 RPS12P24-201ENST00000412619 387 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.31□□□□□ -2.04
LIM2P55344 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.31□□□□□ -2.04
LIM2P55344 SKA2P1-201ENST00000425592 390 ntBASIC2.31□□□□□ -2.04
LIM2P55344 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 AC009414.1-201ENST00000427200 443 ntBASIC2.31□□□□□ -2.04
LIM2P55344 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.31□□□□□ -2.04
LIM2P55344 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.31□□□□□ -2.04
LIM2P55344 AL136380.1-201ENST00000447970 162 ntBASIC2.31□□□□□ -2.04
LIM2P55344 RPS15AP27-201ENST00000449183 343 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC003071.1-201ENST00000451219 789 ntBASIC2.31□□□□□ -2.04
LIM2P55344 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.31□□□□□ -2.04
LIM2P55344 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 RPL31P41-201ENST00000477967 372 ntBASIC2.31□□□□□ -2.04
LIM2P55344 MTND1P3-201ENST00000484956 952 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC007182.2-201ENST00000489251 402 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.31□□□□□ -2.04
LIM2P55344 SNORD19.2-201ENST00000516978 73 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.31□□□□□ -2.04
LIM2P55344 OR5BN1P-201ENST00000532955 829 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC007834.2-201ENST00000536310 343 ntBASIC2.31□□□□□ -2.04
LIM2P55344 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.31□□□□□ -2.04
LIM2P55344 AC027176.1-201ENST00000560204 514 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC008088.1-201ENST00000580993 280 ntBASIC2.31□□□□□ -2.04
LIM2P55344 NRBF2P1-201ENST00000587407 859 ntBASIC2.31□□□□□ -2.04
LIM2P55344 HMGN1P30-201ENST00000589286 268 ntBASIC2.31□□□□□ -2.04
LIM2P55344 BNIP3P9-201ENST00000603714 553 ntBASIC2.31□□□□□ -2.04
LIM2P55344 Z94722.1-201ENST00000604328 474 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC121247.2-201ENST00000604776 136 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC068276.1-201ENST00000605793 379 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
LIM2P55344 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 AC091304.9-201ENST00000612091 226 ntBASIC2.31□□□□□ -2.04
LIM2P55344 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
LIM2P55344 AC078883.4-201ENST00000623218 367 ntBASIC2.31□□□□□ -2.04
LIM2P55344 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIM2P55344 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LIM2P55344 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.31□□□□□ -2.04
LIM2P55344 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LIM2P55344 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
LIM2P55344 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LIM2P55344 SNORD56.2-201ENST00000363242 71 ntBASIC2.3□□□□□ -2.04
LIM2P55344 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
LIM2P55344 RN7SKP226-201ENST00000364912 300 ntBASIC2.3□□□□□ -2.04
LIM2P55344 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
LIM2P55344 RNU6-750P-201ENST00000390946 107 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AL513475.1-201ENST00000406602 315 ntBASIC2.3□□□□□ -2.04
LIM2P55344 RPS3AP3-201ENST00000411933 242 ntBASIC2.3□□□□□ -2.04
LIM2P55344 HMGN1P14-201ENST00000412459 517 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AL589872.1-201ENST00000426602 288 ntBASIC2.3□□□□□ -2.04
LIM2P55344 MED13P1-201ENST00000428342 171 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC098826.1-201ENST00000433943 471 ntBASIC2.3□□□□□ -2.04
LIM2P55344 RPS24P1-201ENST00000438550 371 ntBASIC2.3□□□□□ -2.04
LIM2P55344 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.3□□□□□ -2.04
LIM2P55344 BRK1P2-201ENST00000442875 223 ntBASIC2.3□□□□□ -2.04
LIM2P55344 UBBP3-201ENST00000445497 241 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
LIM2P55344 SNORD42A-201ENST00000459584 64 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 AC114781.4-201ENST00000513707 639 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC119751.5-201ENST00000514077 770 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.3□□□□□ -2.04
LIM2P55344 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 AP003122.3-201ENST00000526316 255 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AP003072.2-201ENST00000527756 676 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AP003181.2-201ENST00000528941 181 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC084851.1-201ENST00000529105 249 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 OSBPL9P5-201ENST00000542581 171 ntBASIC2.3□□□□□ -2.04
LIM2P55344 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.3□□□□□ -2.04
LIM2P55344 AC013562.2-201ENST00000611632 603 ntBASIC2.3□□□□□ -2.04
LIM2P55344 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms