Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA31.26-201ENST00000517250 137 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AP001804.3-201ENST00000525146 880 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AC027807.1-201ENST00000559921 996 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AC005000.2-201ENST00000605468 310 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC022893.3-201ENST00000607665 437 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH11P55287 AC130324.3-201ENST00000614165 542 ntBASIC2.87□□□□□ -1.95
CDH11P55287 U6atac.1-201ENST00000616025 117 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC027309.3-201ENST00000623419 351 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL160394.1-201ENST00000624765 724 ntBASIC2.87□□□□□ -1.95
CDH11P55287 MIR3688-2-201ENST00000636963 87 ntBASIC2.87□□□□□ -1.95
CDH11P55287 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH11P55287 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CDH11P55287 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH11P55287 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH11P55287 AL049641.1-201ENST00000441055 1948 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
CDH11P55287 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDH11P55287 Y_RNA.256-201ENST00000364594 104 ntBASIC2.86□□□□□ -1.95
CDH11P55287 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH11P55287 RNU6-1029P-201ENST00000384109 107 ntBASIC2.86□□□□□ -1.95
CDH11P55287 SNORD115-47-201ENST00000391226 86 ntBASIC2.86□□□□□ -1.95
CDH11P55287 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
CDH11P55287 RNU6-387P-201ENST00000411331 105 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 AL590383.1-201ENST00000428602 75 ntBASIC2.86□□□□□ -1.95
CDH11P55287 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH11P55287 AC092573.2-201ENST00000434546 243 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH11P55287 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH11P55287 MTND1P18-201ENST00000448191 573 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC073415.1-201ENST00000449240 153 ntBASIC2.86□□□□□ -1.95
CDH11P55287 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 RPS29P15-201ENST00000458329 171 ntBASIC2.86□□□□□ -1.95
CDH11P55287 RNU7-63P-201ENST00000459054 62 ntBASIC2.86□□□□□ -1.95
CDH11P55287 RNU6-953P-201ENST00000459154 107 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC006512.1-201ENST00000468816 291 ntBASIC2.86□□□□□ -1.95
CDH11P55287 KC877373.1-201ENST00000479066 408 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AL160314.1-201ENST00000490836 438 ntBASIC2.86□□□□□ -1.95
CDH11P55287 RN7SL504P-201ENST00000494496 287 ntBASIC2.86□□□□□ -1.95
CDH11P55287 SUMO2P6-201ENST00000505273 288 ntBASIC2.86□□□□□ -1.95
CDH11P55287 RNU6-677P-201ENST00000516914 101 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.86□□□□□ -1.95
CDH11P55287 ATP5F1P5-201ENST00000526403 760 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH11P55287 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
CDH11P55287 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH11P55287 AC034105.3-201ENST00000565294 442 ntBASIC2.86□□□□□ -1.95
CDH11P55287 MIR4703-201ENST00000577728 79 ntBASIC2.86□□□□□ -1.95
CDH11P55287 MIR4474-201ENST00000579189 78 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC006504.3-201ENST00000586818 523 ntBASIC2.86□□□□□ -1.95
CDH11P55287 YPEL5P2-201ENST00000605553 359 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC008536.2-201ENST00000607284 349 ntBASIC2.86□□□□□ -1.95
CDH11P55287 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AC007014.2-201ENST00000615581 479 ntBASIC2.86□□□□□ -1.95
CDH11P55287 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.86□□□□□ -1.95
CDH11P55287 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
CDH11P55287 MIR8057-201ENST00000620957 69 ntBASIC2.86□□□□□ -1.95
CDH11P55287 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH11P55287 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH11P55287 MTND5P19-201ENST00000424872 1794 ntBASIC2.86□□□□□ -1.95
CDH11P55287 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH11P55287 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH11P55287 AF117829.1-206ENST00000621883 3802 ntBASIC2.86□□□□□ -1.95
CDH11P55287 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH11P55287 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH11P55287 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CDH11P55287 RNU4-12P-201ENST00000365233 139 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RNU6-996P-201ENST00000365438 107 ntBASIC2.85□□□□□ -1.95
CDH11P55287 SNORA69-201ENST00000383895 132 ntBASIC2.85□□□□□ -1.95
CDH11P55287 Y_RNA.402-201ENST00000383972 102 ntBASIC2.85□□□□□ -1.95
CDH11P55287 MIR325-201ENST00000385260 98 ntBASIC2.85□□□□□ -1.95
CDH11P55287 SAR1AP2-201ENST00000392696 594 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AL357075.1-201ENST00000404107 726 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC096664.2-201ENST00000411843 406 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC063979.1-201ENST00000415539 377 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH11P55287 ELOCP14-201ENST00000428070 331 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AC000111.3-201ENST00000433478 193 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 ELOCP7-201ENST00000439968 331 ntBASIC2.85□□□□□ -1.95
CDH11P55287 PIGFP3-201ENST00000441918 722 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RPS12P18-201ENST00000442381 270 ntBASIC2.85□□□□□ -1.95
CDH11P55287 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH11P55287 SSXP4-201ENST00000451349 245 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RNA5SP310-201ENST00000459084 116 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RNU6-261P-201ENST00000459506 102 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RPL21P8-201ENST00000465083 535 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
CDH11P55287 RPS29P25-201ENST00000481709 171 ntBASIC2.85□□□□□ -1.95
CDH11P55287 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms