Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC104685.1-201ENST00000502445 371 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH4P55283 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
CDH4P55283 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH4P55283 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH4P55283 MIR3945-201ENST00000581853 98 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC091152.3-201ENST00000604227 325 ntBASIC2.24□□□□□ -2.05
CDH4P55283 BCRP9-201ENST00000605312 388 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH4P55283 AC091965.4-201ENST00000607691 587 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC069294.1-201ENST00000608397 350 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC013470.4-201ENST00000619978 986 ntBASIC2.24□□□□□ -2.05
CDH4P55283 PISRT1-201ENST00000626175 531 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC025048.6-202ENST00000627667 438 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC093591.3-201ENST00000634516 308 ntBASIC2.24□□□□□ -2.05
CDH4P55283 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
CDH4P55283 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH4P55283 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDH4P55283 AC004944.1-201ENST00000517807 3059 ntBASIC2.23□□□□□ -2.05
CDH4P55283 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CDH4P55283 NACAP2-201ENST00000318548 624 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNA5SP88-201ENST00000365560 109 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNU6-701P-201ENST00000384059 107 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNU6-19P-201ENST00000384718 107 ntBASIC2.23□□□□□ -2.05
CDH4P55283 SNORA11.4-201ENST00000408823 129 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH4P55283 AF274854.1-201ENST00000413236 615 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH4P55283 AC007560.1-201ENST00000426912 237 ntBASIC2.23□□□□□ -2.05
CDH4P55283 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH4P55283 RPL30P4-201ENST00000429309 333 ntBASIC2.23□□□□□ -2.05
CDH4P55283 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH4P55283 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH4P55283 IFNA11P-201ENST00000446352 526 ntBASIC2.23□□□□□ -2.05
CDH4P55283 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH4P55283 RPL23AP41-201ENST00000484754 458 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AC091951.3-201ENST00000504093 246 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNU1-41P-201ENST00000516161 162 ntBASIC2.23□□□□□ -2.05
CDH4P55283 RNU1-48P-201ENST00000516400 162 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH4P55283 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH4P55283 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH4P55283 RPS3AP23-202ENST00000574601 686 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AL450336.1-201ENST00000605180 586 ntBASIC2.23□□□□□ -2.05
CDH4P55283 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AC092106.3-201ENST00000611308 722 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
CDH4P55283 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH4P55283 AC091965.5-201ENST00000624785 342 ntBASIC2.23□□□□□ -2.05
CDH4P55283 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH4P55283 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH4P55283 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CDH4P55283 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.22□□□□□ -2.05
CDH4P55283 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CDH4P55283 RNU6-157P-201ENST00000383957 107 ntBASIC2.22□□□□□ -2.05
CDH4P55283 MIR513B-201ENST00000385136 84 ntBASIC2.22□□□□□ -2.05
CDH4P55283 RNU4-72P-201ENST00000410754 173 ntBASIC2.22□□□□□ -2.05
CDH4P55283 HMGB1P11-201ENST00000413899 637 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH4P55283 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH4P55283 BX276092.3-201ENST00000424182 230 ntBASIC2.22□□□□□ -2.05
CDH4P55283 LARP1BP3-201ENST00000437229 869 ntBASIC2.22□□□□□ -2.05
CDH4P55283 MTND4P25-201ENST00000441039 533 ntBASIC2.22□□□□□ -2.05
CDH4P55283 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH4P55283 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH4P55283 AC004263.1-201ENST00000479327 332 ntBASIC2.22□□□□□ -2.05
CDH4P55283 RPL9P6-201ENST00000492764 598 ntBASIC2.22□□□□□ -2.05
CDH4P55283 SNORA31.3-201ENST00000516029 96 ntBASIC2.22□□□□□ -2.05
CDH4P55283 RNU6-703P-201ENST00000516946 107 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AP005902.1-201ENST00000521358 186 ntBASIC2.22□□□□□ -2.05
CDH4P55283 MTND2P32-201ENST00000521584 1038 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH4P55283 MTND4P33-201ENST00000556706 766 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AC027807.1-201ENST00000559921 996 ntBASIC2.22□□□□□ -2.05
CDH4P55283 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
CDH4P55283 RPS15AP11-201ENST00000594193 385 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH4P55283 BNIP3P40-201ENST00000596017 556 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AL355472.4-201ENST00000610233 626 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AC090970.3-201ENST00000612566 866 ntBASIC2.22□□□□□ -2.05
CDH4P55283 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDH4P55283 AC005858.4-201ENST00000623191 700 ntBASIC2.22□□□□□ -2.05
CDH4P55283 U6.99-201ENST00000637524 83 ntBASIC2.22□□□□□ -2.05
CDH4P55283 AC103706.2-201ENST00000638080 240 ntBASIC2.22□□□□□ -2.05
CDH4P55283 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH4P55283 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH4P55283 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDH4P55283 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH4P55283 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH4P55283 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
CDH4P55283 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH4P55283 ZNF90P2-204ENST00000419323 1075 ntBASIC2.21□□□□□ -2.06
CDH4P55283 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH4P55283 PTGES3P4-201ENST00000426243 356 ntBASIC2.21□□□□□ -2.06
CDH4P55283 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH4P55283 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH4P55283 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH4P55283 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH4P55283 AP001324.2-201ENST00000461163 319 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms