Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.11□□□□□ -2.23
GTF2A1P52655 AC124293.1-201ENST00000530034 493 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC135279.1-201ENST00000543493 504 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.11□□□□□ -2.23
GTF2A1P52655 DUXAP1-201ENST00000556632 463 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.11□□□□□ -2.23
GTF2A1P52655 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.11□□□□□ -2.23
GTF2A1P52655 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.11□□□□□ -2.23
GTF2A1P52655 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
GTF2A1P52655 AP005901.5-201ENST00000545779 1796 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
GTF2A1P52655 ZNF849P-201ENST00000594711 1566 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.1□□□□□ -2.23
GTF2A1P52655 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AL591034.2-201ENST00000402839 359 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.1□□□□□ -2.23
GTF2A1P52655 UBE2V1P4-201ENST00000425374 344 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 SKA2P1-201ENST00000425592 390 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 TOMM20P4-201ENST00000427861 435 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
GTF2A1P52655 AL161651.1-201ENST00000440882 223 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC002381.1-201ENST00000447049 280 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC023824.3-201ENST00000569003 562 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC005951.2-201ENST00000576282 495 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC103987.3-201ENST00000582071 292 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.1□□□□□ -2.23
GTF2A1P52655 AC024257.5-201ENST00000612739 531 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 AC104820.1-201ENST00000624183 307 ntBASIC1.1□□□□□ -2.23
GTF2A1P52655 RNA5SP126-201ENST00000365092 109 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 MIR1289-2-201ENST00000408360 111 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 ZNF965P-201ENST00000432501 817 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 RNU6-775P-201ENST00000459318 96 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 RPL32P14-201ENST00000463196 378 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AC117503.1-201ENST00000472241 394 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AP005660.1-201ENST00000522972 293 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AP003497.1-201ENST00000528472 562 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.09□□□□□ -2.23
GTF2A1P52655 DNAJC19P9-201ENST00000555084 351 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AC025918.2-201ENST00000558683 763 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AC090079.2-201ENST00000575289 768 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 MIR4303-201ENST00000581299 66 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 BNIP3P23-201ENST00000599655 511 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AC025811.1-201ENST00000604312 472 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AC069304.2-201ENST00000605154 435 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AL355802.3-201ENST00000607571 545 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AP005229.2-201ENST00000609980 697 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 AL163051.2-201ENST00000618976 735 ntBASIC1.09□□□□□ -2.23
GTF2A1P52655 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.09□□□□□ -2.23
GTF2A1P52655 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.24
GTF2A1P52655 RNA5SP465-201ENST00000391195 109 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC097463.2-201ENST00000421074 142 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC019178.2-201ENST00000423595 505 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 FAM204CP-201ENST00000424489 642 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AL121578.1-201ENST00000428051 892 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 TPTE2P1-204ENST00000435256 593 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 MTCO2P20-201ENST00000437339 673 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.08□□□□□ -2.24
GTF2A1P52655 USP9YP34-201ENST00000453983 808 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.08□□□□□ -2.24
GTF2A1P52655 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.08□□□□□ -2.24
GTF2A1P52655 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.08□□□□□ -2.24
GTF2A1P52655 AC048346.1-201ENST00000510247 144 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 SNORA48.11-201ENST00000517015 89 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.08□□□□□ -2.24
GTF2A1P52655 AC006199.1-201ENST00000548728 219 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC012414.2-201ENST00000559474 187 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC021739.1-201ENST00000559631 174 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 SNRPGP17-201ENST00000603780 214 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.08□□□□□ -2.24
GTF2A1P52655 AL109620.1-201ENST00000618738 1197 ntBASIC1.08□□□□□ -2.24
GTF2A1P52655 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.08□□□□□ -2.24
GTF2A1P52655 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
GTF2A1P52655 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.08□□□□□ -2.24
GTF2A1P52655 ZNF209P-201ENST00000593450 2304 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RNU6-582P-201ENST00000362989 107 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RNU1-23P-201ENST00000363361 144 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RNU6-657P-201ENST00000383904 107 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 MIR95-201ENST00000385072 81 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RNU11-3P-201ENST00000391111 133 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AC245517.4-201ENST00000448601 281 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 FCF1P6-201ENST00000456841 595 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AC006512.1-201ENST00000468816 291 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RPL36AP48-201ENST00000485521 314 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 RNU6-840P-201ENST00000517275 65 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.07□□□□□ -2.24
GTF2A1P52655 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.07□□□□□ -2.24
GTF2A1P52655 NDUFA5P6-201ENST00000542110 379 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AC125611.1-201ENST00000549563 229 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.07□□□□□ -2.24
GTF2A1P52655 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.07□□□□□ -2.24
GTF2A1P52655 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.07□□□□□ -2.24
GTF2A1P52655 AC005668.1-201ENST00000571142 476 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 ROCK1P1-201ENST00000573767 549 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AC002545.1-201ENST00000592511 181 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 NIFKP6-201ENST00000598115 845 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 AL603758.1-201ENST00000618654 241 ntBASIC1.07□□□□□ -2.24
GTF2A1P52655 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
GTF2A1P52655 SNORD115-48-201ENST00000364764 76 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms