Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OR5BN1P-201ENST00000532955 829 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCNKAP51800 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCNKAP51800 AC068135.2-201ENST00000569293 1028 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 YWHAEP7-203ENST00000622054 312 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCNKAP51800 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLCNKAP51800 API5P2-201ENST00000397055 1498 ntBASIC3.14□□□□□ -1.91
CLCNKAP51800 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCNKAP51800 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 AL137003.2-201ENST00000606924 2538 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNU6-799P-201ENST00000363567 107 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNU6-288P-201ENST00000363690 104 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 SNORD115-7-201ENST00000365306 82 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNU6-996P-201ENST00000365438 107 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNU6-190P-201ENST00000384154 102 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 Y_RNA.576-201ENST00000384781 102 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 MIR483-201ENST00000385070 76 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 USP9YP6-201ENST00000413550 854 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 BTF3L4P3-201ENST00000418879 476 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RPL7P46-201ENST00000425129 740 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCNKAP51800 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCNKAP51800 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCNKAP51800 AC073415.1-201ENST00000449240 153 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNU6-261P-201ENST00000459506 102 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCNKAP51800 RBBP4P6-201ENST00000508098 202 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 TTC39CP1-201ENST00000512513 755 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNA5SP401-201ENST00000515920 127 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 SNORA31.3-201ENST00000516029 96 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 RNA5SP503-201ENST00000517047 117 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLCNKAP51800 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCNKAP51800 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC002545.1-201ENST00000592511 181 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 BNIP3P30-201ENST00000601184 574 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC013553.2-201ENST00000604244 589 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC130324.3-201ENST00000614165 542 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC007998.5-201ENST00000622938 237 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 AC011155.2-201ENST00000623202 216 ntBASIC3.13□□□□□ -1.91
CLCNKAP51800 FER-210ENST00000628534 558 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCNKAP51800 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCNKAP51800 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
CLCNKAP51800 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCNKAP51800 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 Y_RNA.573-201ENST00000384763 105 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 RNU6-1068P-201ENST00000410958 103 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 NDUFB4P7-201ENST00000423198 363 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 SEPT14P3-201ENST00000439401 183 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AL732372.2-207ENST00000445840 183 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 DPPA3P1-201ENST00000448050 469 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AL118520.1-201ENST00000450770 291 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 SEPT14P2-201ENST00000453405 183 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 GMFBP1-201ENST00000467831 427 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AL163973.1-201ENST00000484753 577 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 SEPT14P4-201ENST00000513445 186 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 RNU6-123P-201ENST00000516163 102 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 RNU6-927P-201ENST00000516199 100 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 FO082796.1-201ENST00000523795 183 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AP005435.4-201ENST00000529514 284 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 MIR4703-201ENST00000577728 79 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AC104763.2-201ENST00000604179 382 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AL365204.3-201ENST00000612448 685 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AC012409.4-201ENST00000612923 249 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CLCNKAP51800 AC010338.1-201ENST00000621823 717 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AC091903.1-201ENST00000624322 454 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCNKAP51800 U6.114-201ENST00000636407 96 ntBASIC3.12□□□□□ -1.91
CLCNKAP51800 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCNKAP51800 CKAP2P1-201ENST00000555477 2049 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms