Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.11□□□□□ -1.43
PRIM1P49642 RNU5E-7P-201ENST00000365290 117 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RNU1-64P-201ENST00000365443 163 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RNU6-449P-201ENST00000383914 107 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RNU6-1289P-201ENST00000384431 106 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PRIM1P49642 RPS29P17-201ENST00000430795 166 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RPS6P12-201ENST00000432491 726 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.11□□□□□ -1.43
PRIM1P49642 AC008267.6-201ENST00000441664 139 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 H2AFZP5-201ENST00000446960 382 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.11□□□□□ -1.43
PRIM1P49642 AC117440.1-201ENST00000474107 571 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RNU6-1114P-201ENST00000516022 107 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 SNORA31.9-201ENST00000516429 84 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.11□□□□□ -1.43
PRIM1P49642 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRIM1P49642 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PRIM1P49642 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRIM1P49642 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.11□□□□□ -1.43
PRIM1P49642 AC083843.3-201ENST00000623679 2186 ntBASIC6.11□□□□□ -1.43
PRIM1P49642 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PRIM1P49642 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRIM1P49642 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PRIM1P49642 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.1□□□□□ -1.43
PRIM1P49642 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
PRIM1P49642 AC021146.4-201ENST00000309229 279 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 RNU6-923P-201ENST00000364753 107 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 UBBP2-201ENST00000376781 231 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 Y_RNA.400-201ENST00000383963 111 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 Y_RNA.568-201ENST00000384742 113 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 MIR153-2-201ENST00000385225 87 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.1□□□□□ -1.43
PRIM1P49642 EIF1AXP1-201ENST00000419267 435 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AL162725.1-201ENST00000435405 301 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.1□□□□□ -1.43
PRIM1P49642 AC009296.1-201ENST00000443146 155 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AL359073.1-201ENST00000448036 403 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AC074133.1-201ENST00000515696 183 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 RN7SKP272-201ENST00000516988 232 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.1□□□□□ -1.43
PRIM1P49642 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.1□□□□□ -1.43
PRIM1P49642 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 AC006349.1-201ENST00000555526 235 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.1□□□□□ -1.43
PRIM1P49642 MIR5692C2-201ENST00000577959 77 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.1□□□□□ -1.43
PRIM1P49642 AC023043.4-201ENST00000612081 449 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AL360181.4-201ENST00000621752 134 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 RNA5SP196-201ENST00000625967 102 ntBASIC6.1□□□□□ -1.43
PRIM1P49642 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PRIM1P49642 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.1□□□□□ -1.43
PRIM1P49642 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRIM1P49642 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.1□□□□□ -1.43
PRIM1P49642 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.1□□□□□ -1.43
PRIM1P49642 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.09□□□□□ -1.43
PRIM1P49642 AC112198.2-201ENST00000426589 6996 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.09□□□□□ -1.43
PRIM1P49642 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRIM1P49642 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PRIM1P49642 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PRIM1P49642 SNORD116-18-201ENST00000383961 92 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 RNU6-178P-201ENST00000384631 104 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.09□□□□□ -1.43
PRIM1P49642 RN7SL517P-201ENST00000462240 305 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 AP001025.1-201ENST00000486139 332 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 AC005840.1-201ENST00000498412 377 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 Y_RNA.719-201ENST00000517156 106 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 MIR92B-201ENST00000607575 96 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 AL023881.1-201ENST00000621088 301 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 AC027309.3-201ENST00000623419 351 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRIM1P49642 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.09□□□□□ -1.43
PRIM1P49642 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.09□□□□□ -1.43
PRIM1P49642 STX3-208ENST00000641815 3236 ntBASIC6.09□□□□□ -1.43
PRIM1P49642 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRIM1P49642 AC104260.2-201ENST00000623551 3497 ntBASIC6.09□□□□□ -1.44
PRIM1P49642 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PRIM1P49642 A2MP1-204ENST00000566278 4130 ntBASIC6.09□□□□□ -1.44
PRIM1P49642 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PRIM1P49642 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PRIM1P49642 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.08□□□□□ -1.44
PRIM1P49642 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 AP001642.1-201ENST00000624727 2117 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PRIM1P49642 SALL4P2-201ENST00000423288 2910 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRIM1P49642 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PRIM1P49642 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.08□□□□□ -1.44
PRIM1P49642 Y_RNA.286-201ENST00000364813 102 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 RNU6-926P-201ENST00000384075 107 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 SNORD12B-201ENST00000410433 91 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 RPS12P10-201ENST00000427031 377 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 RPL12P46-201ENST00000436610 195 ntBASIC6.08□□□□□ -1.44
PRIM1P49642 BTF3P6-201ENST00000448054 499 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms