Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MIR5583-1-201ENST00000580941 59 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AC060780.3-201ENST00000589464 80 ntBASIC3.18□□□□□ -1.9
CENPAP49450 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
CENPAP49450 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CENPAP49450 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPAP49450 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CENPAP49450 RNA5SP515-201ENST00000364570 118 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RNU4-20P-201ENST00000365601 151 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RNU6-332P-201ENST00000391193 108 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RNA5SP118-201ENST00000410385 109 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPAP49450 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.17□□□□□ -1.9
CENPAP49450 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
CENPAP49450 ZNF863P-201ENST00000426746 417 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AP000907.1-201ENST00000428428 510 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPAP49450 AL121601.2-201ENST00000438019 707 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RPS24P13-201ENST00000442520 397 ntBASIC3.17□□□□□ -1.9
CENPAP49450 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CENPAP49450 RPS3AP46-201ENST00000448352 682 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AL590639.1-201ENST00000456484 337 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RPL23AP11-201ENST00000475260 469 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AL135752.1-201ENST00000479477 471 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RNU6-1282P-201ENST00000516735 96 ntBASIC3.17□□□□□ -1.9
CENPAP49450 RNA5SP165-201ENST00000517142 115 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC026333.2-201ENST00000542164 106 ntBASIC3.17□□□□□ -1.9
CENPAP49450 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.17□□□□□ -1.9
CENPAP49450 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.17□□□□□ -1.9
CENPAP49450 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPAP49450 BNIP3P10-201ENST00000605360 577 ntBASIC3.17□□□□□ -1.9
CENPAP49450 MIR7851-201ENST00000610611 160 ntBASIC3.17□□□□□ -1.9
CENPAP49450 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.17□□□□□ -1.9
CENPAP49450 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC100810.6-201ENST00000638068 285 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC119674.1-207ENST00000641355 633 ntBASIC3.17□□□□□ -1.9
CENPAP49450 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
CENPAP49450 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CENPAP49450 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPAP49450 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CENPAP49450 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPAP49450 HSPA8P4-201ENST00000511877 1920 ntBASIC3.17□□□□□ -1.9
CENPAP49450 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CENPAP49450 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPAP49450 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CENPAP49450 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.16□□□□□ -1.9
CENPAP49450 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CENPAP49450 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
CENPAP49450 Y_RNA.86-201ENST00000363020 111 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNA5SP139-201ENST00000364340 117 ntBASIC3.16□□□□□ -1.9
CENPAP49450 Y_RNA.231-201ENST00000364358 102 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-715P-201ENST00000365204 103 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU1-64P-201ENST00000365443 163 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-38P-201ENST00000384085 107 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-140P-201ENST00000384566 108 ntBASIC3.16□□□□□ -1.9
CENPAP49450 SNORD70.1-201ENST00000391007 85 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RN7SKP27-201ENST00000410684 333 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNA5SP492-201ENST00000411330 114 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
CENPAP49450 HMGB3P11-201ENST00000440127 604 ntBASIC3.16□□□□□ -1.9
CENPAP49450 MTATP6P23-201ENST00000440153 476 ntBASIC3.16□□□□□ -1.9
CENPAP49450 MTCO3P18-201ENST00000440206 761 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.16□□□□□ -1.9
CENPAP49450 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
CENPAP49450 FABP5P15-201ENST00000453566 214 ntBASIC3.16□□□□□ -1.9
CENPAP49450 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-333P-201ENST00000459117 107 ntBASIC3.16□□□□□ -1.9
CENPAP49450 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.16□□□□□ -1.9
CENPAP49450 RPL30P14-201ENST00000482744 348 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
CENPAP49450 MTCYBP18-201ENST00000501056 747 ntBASIC3.16□□□□□ -1.9
CENPAP49450 SUMO2P6-201ENST00000505273 288 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC074344.1-201ENST00000512823 224 ntBASIC3.16□□□□□ -1.9
CENPAP49450 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-1038P-201ENST00000516516 104 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
CENPAP49450 RNU6-1315P-201ENST00000517187 99 ntBASIC3.16□□□□□ -1.9
CENPAP49450 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
CENPAP49450 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AC136601.2-201ENST00000604356 474 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AL035413.2-201ENST00000604801 525 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 SNORD39.4-201ENST00000620099 78 ntBASIC3.16□□□□□ -1.9
CENPAP49450 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
CENPAP49450 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
CENPAP49450 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms