Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC074050.1-201ENST00000563247 211 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CR1P49238 RPS3AP23-202ENST00000574601 686 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 MTATP6P24-201ENST00000576835 677 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AC105245.1-201ENST00000581934 244 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.04□□□□□ -2.08
CX3CR1P49238 AC006023.1-201ENST00000603944 259 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AC091965.4-201ENST00000607691 587 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AL359854.1-201ENST00000614203 1594 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AC021755.4-201ENST00000616620 456 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 AC012640.5-201ENST00000623897 319 ntBASIC2.04□□□□□ -2.08
CX3CR1P49238 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CR1P49238 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CX3CR1P49238 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CR1P49238 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CX3CR1P49238 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC104454.1-201ENST00000421341 1401 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CR1P49238 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 RNU6-701P-201ENST00000384059 107 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 ZNF90P2-204ENST00000419323 1075 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC098592.1-201ENST00000419352 333 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC003685.2-201ENST00000422795 395 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 RPS3AP44-201ENST00000425466 790 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 RPS15AP28-201ENST00000435088 386 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC004383.1-201ENST00000438135 289 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AL354941.1-201ENST00000438600 464 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AL031659.1-201ENST00000447075 539 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 MTCO1P42-201ENST00000457379 726 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AP001324.2-201ENST00000461163 319 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC068781.1-201ENST00000488231 618 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CR1P49238 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC118465.1-201ENST00000513820 1271 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.03□□□□□ -2.08
CX3CR1P49238 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AP006587.4-201ENST00000526053 529 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC090888.2-201ENST00000559765 1144 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AP000811.1-201ENST00000603803 651 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CR1P49238 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CR1P49238 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CR1P49238 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CR1P49238 U6.99-201ENST00000637524 83 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CR1P49238 AL109809.4-201ENST00000603520 2185 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
CX3CR1P49238 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CX3CR1P49238 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CX3CR1P49238 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CX3CR1P49238 Y_RNA.46-201ENST00000362695 102 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 RNU6-486P-201ENST00000363116 107 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 RNU5A-8P-201ENST00000364102 114 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 RNU6-14P-201ENST00000384630 106 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CX3CR1P49238 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CX3CR1P49238 RPS4XP8-201ENST00000402039 771 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.02□□□□□ -2.09
CX3CR1P49238 USP9YP6-201ENST00000413550 854 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 HMGB1P11-201ENST00000413899 637 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.02□□□□□ -2.09
CX3CR1P49238 EIF4EP4-201ENST00000424916 578 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 PTGES3P4-201ENST00000426243 356 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AC092001.1-201ENST00000453012 261 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC108059.3-201ENST00000456388 214 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.02□□□□□ -2.09
CX3CR1P49238 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CX3CR1P49238 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CX3CR1P49238 CBX3P7-201ENST00000532876 502 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AL133241.1-201ENST00000556832 487 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC027176.1-201ENST00000560204 514 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.02□□□□□ -2.09
CX3CR1P49238 AC009094.1-201ENST00000564443 426 ntBASIC2.02□□□□□ -2.09
CX3CR1P49238 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms