Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LHX1P48742 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
LHX1P48742 AC103988.1-201ENST00000566382 2177 ntBASIC2.87□□□□□ -1.95
LHX1P48742 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LHX1P48742 RNU6-884P-201ENST00000363889 107 ntBASIC2.87□□□□□ -1.95
LHX1P48742 MIR888-201ENST00000401186 77 ntBASIC2.87□□□□□ -1.95
LHX1P48742 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
LHX1P48742 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.87□□□□□ -1.95
LHX1P48742 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
LHX1P48742 AC016907.1-201ENST00000419483 435 ntBASIC2.87□□□□□ -1.95
LHX1P48742 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.87□□□□□ -1.95
LHX1P48742 AL358934.1-201ENST00000432346 324 ntBASIC2.87□□□□□ -1.95
LHX1P48742 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LHX1P48742 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 AC079781.2-201ENST00000446424 169 ntBASIC2.87□□□□□ -1.95
LHX1P48742 MTCYBP1-201ENST00000454315 1119 ntBASIC2.87□□□□□ -1.95
LHX1P48742 RNU7-23P-201ENST00000459465 62 ntBASIC2.87□□□□□ -1.95
LHX1P48742 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
LHX1P48742 AC096725.1-201ENST00000514266 313 ntBASIC2.87□□□□□ -1.95
LHX1P48742 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
LHX1P48742 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.87□□□□□ -1.95
LHX1P48742 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.87□□□□□ -1.95
LHX1P48742 AL391840.1-201ENST00000571144 367 ntBASIC2.87□□□□□ -1.95
LHX1P48742 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.87□□□□□ -1.95
LHX1P48742 RPL12P50-201ENST00000603116 116 ntBASIC2.87□□□□□ -1.95
LHX1P48742 AC005046.1-201ENST00000608515 625 ntBASIC2.87□□□□□ -1.95
LHX1P48742 MIR6852-201ENST00000621699 66 ntBASIC2.87□□□□□ -1.95
LHX1P48742 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LHX1P48742 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LHX1P48742 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.86□□□□□ -1.95
LHX1P48742 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
LHX1P48742 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
LHX1P48742 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
LHX1P48742 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL663109.1-201ENST00000411498 844 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC092809.3-201ENST00000415453 231 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC114491.1-201ENST00000416095 246 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.86□□□□□ -1.95
LHX1P48742 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 MTCO3P5-201ENST00000433620 714 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 AC108938.1-201ENST00000451204 136 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL109933.2-201ENST00000452651 260 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 RPL26P9-201ENST00000457466 433 ntBASIC2.86□□□□□ -1.95
LHX1P48742 SNORA59A-201ENST00000459326 152 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC108078.2-201ENST00000510750 236 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 Y_RNA.689-201ENST00000516589 107 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.86□□□□□ -1.95
LHX1P48742 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.86□□□□□ -1.95
LHX1P48742 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 AP003072.2-201ENST00000527756 676 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.86□□□□□ -1.95
LHX1P48742 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
LHX1P48742 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.86□□□□□ -1.95
LHX1P48742 MTND4LP5-201ENST00000605152 292 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL121992.2-201ENST00000606262 256 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AC068880.5-201ENST00000624331 290 ntBASIC2.86□□□□□ -1.95
LHX1P48742 AL512643.1-201ENST00000635735 524 ntBASIC2.86□□□□□ -1.95
LHX1P48742 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LHX1P48742 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
LHX1P48742 AC091564.4-201ENST00000533934 2194 ntBASIC2.85□□□□□ -1.95
LHX1P48742 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LHX1P48742 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LHX1P48742 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LHX1P48742 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LHX1P48742 RNU6-282P-201ENST00000365357 103 ntBASIC2.85□□□□□ -1.95
LHX1P48742 RNU6-108P-201ENST00000365558 107 ntBASIC2.85□□□□□ -1.95
LHX1P48742 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LHX1P48742 RNU6-1042P-201ENST00000384204 107 ntBASIC2.85□□□□□ -1.95
LHX1P48742 SNORA24.1-201ENST00000384401 135 ntBASIC2.85□□□□□ -1.95
LHX1P48742 MIR196B-201ENST00000384852 84 ntBASIC2.85□□□□□ -1.95
LHX1P48742 RNA5SP344-201ENST00000411081 104 ntBASIC2.85□□□□□ -1.95
LHX1P48742 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AL109913.1-201ENST00000421173 514 ntBASIC2.85□□□□□ -1.95
LHX1P48742 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.85□□□□□ -1.95
LHX1P48742 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 C1DP4-201ENST00000455429 424 ntBASIC2.85□□□□□ -1.95
LHX1P48742 TPT1P7-201ENST00000458300 517 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC126389.1-201ENST00000477436 290 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.85□□□□□ -1.95
LHX1P48742 AC116562.3-201ENST00000506136 177 ntBASIC2.85□□□□□ -1.95
LHX1P48742 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms