Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-253P-201ENST00000384730 105 ntBASIC1.26□□□□□ -2.21
RPL28P46779 U8.14-201ENST00000390843 143 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC019129.1-201ENST00000403786 261 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.26□□□□□ -2.21
RPL28P46779 AL158823.1-201ENST00000418441 478 ntBASIC1.26□□□□□ -2.21
RPL28P46779 RPL31P63-201ENST00000422565 375 ntBASIC1.26□□□□□ -2.21
RPL28P46779 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 DNAJC19P4-201ENST00000440115 345 ntBASIC1.26□□□□□ -2.21
RPL28P46779 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 MTCO2P25-201ENST00000447065 681 ntBASIC1.26□□□□□ -2.21
RPL28P46779 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 OR6C5P-201ENST00000452388 923 ntBASIC1.26□□□□□ -2.21
RPL28P46779 MEMO1P3-201ENST00000459811 302 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC139453.3-201ENST00000493276 369 ntBASIC1.26□□□□□ -2.21
RPL28P46779 HMGB1P35-201ENST00000503360 598 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 SNORA4.4-201ENST00000515921 135 ntBASIC1.26□□□□□ -2.21
RPL28P46779 SNORA25.11-201ENST00000515935 105 ntBASIC1.26□□□□□ -2.21
RPL28P46779 SNORA48.11-201ENST00000517015 89 ntBASIC1.26□□□□□ -2.21
RPL28P46779 RNU6-1183P-201ENST00000517054 60 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPL28P46779 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 AP005639.2-201ENST00000527592 928 ntBASIC1.26□□□□□ -2.21
RPL28P46779 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 AL512310.1-201ENST00000548639 172 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPL28P46779 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL28P46779 AC060771.1-201ENST00000582031 164 ntBASIC1.26□□□□□ -2.21
RPL28P46779 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL28P46779 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.26□□□□□ -2.21
RPL28P46779 AC009974.1-201ENST00000608881 455 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC004908.2-201ENST00000609090 574 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AL773524.1-201ENST00000614065 229 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC005296.1-201ENST00000616145 209 ntBASIC1.26□□□□□ -2.21
RPL28P46779 MIR6134-201ENST00000617606 109 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AL158163.2-201ENST00000619110 700 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC013470.4-201ENST00000619978 986 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AP000676.3-201ENST00000623299 569 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC138627.2-201ENST00000624202 601 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AC110994.2-201ENST00000635481 492 ntBASIC1.26□□□□□ -2.21
RPL28P46779 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.26□□□□□ -2.21
RPL28P46779 AC092881.1-201ENST00000638218 2733 ntBASIC1.26□□□□□ -2.21
RPL28P46779 MTND5P6-201ENST00000422338 1798 ntBASIC1.26□□□□□ -2.21
RPL28P46779 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
RPL28P46779 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPL28P46779 RNU6-289P-201ENST00000364093 107 ntBASIC1.25□□□□□ -2.21
RPL28P46779 RNU6-512P-201ENST00000364438 103 ntBASIC1.25□□□□□ -2.21
RPL28P46779 SNORA25B-201ENST00000365507 128 ntBASIC1.25□□□□□ -2.21
RPL28P46779 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
RPL28P46779 RNU6-224P-201ENST00000384055 107 ntBASIC1.25□□□□□ -2.21
RPL28P46779 MIR518A2-201ENST00000384966 87 ntBASIC1.25□□□□□ -2.21
RPL28P46779 RN7SKP32-201ENST00000410167 303 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL28P46779 Z98742.3-201ENST00000418637 326 ntBASIC1.25□□□□□ -2.21
RPL28P46779 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AL139415.2-201ENST00000431968 163 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL28P46779 AL353706.1-201ENST00000436728 494 ntBASIC1.25□□□□□ -2.21
RPL28P46779 SNRPEP7-201ENST00000438350 220 ntBASIC1.25□□□□□ -2.21
RPL28P46779 MTCO1P53-201ENST00000441633 699 ntBASIC1.25□□□□□ -2.21
RPL28P46779 ELOCP30-201ENST00000447108 299 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AL441985.1-201ENST00000457727 251 ntBASIC1.25□□□□□ -2.21
RPL28P46779 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AC018868.1-201ENST00000491307 315 ntBASIC1.25□□□□□ -2.21
RPL28P46779 RPL9P6-201ENST00000492764 598 ntBASIC1.25□□□□□ -2.21
RPL28P46779 CKS1BP2-201ENST00000497342 240 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL28P46779 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.25□□□□□ -2.21
RPL28P46779 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RPL28P46779 AC113347.3-201ENST00000509113 148 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC091965.2-201ENST00000512324 613 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.25□□□□□ -2.21
RPL28P46779 OR5AL2P-201ENST00000532185 920 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL28P46779 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RPL28P46779 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL28P46779 AC010928.2-201ENST00000588017 287 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL078605.1-201ENST00000603529 500 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL713866.2-201ENST00000603579 219 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC024060.1-201ENST00000607052 494 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL021368.1-201ENST00000607490 540 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC124016.2-201ENST00000610058 665 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC018926.1-201ENST00000616335 435 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AL136981.2-201ENST00000617319 734 ntBASIC1.25□□□□□ -2.21
RPL28P46779 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL28P46779 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RPL28P46779 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPL28P46779 SNORA63.3-201ENST00000362682 132 ntBASIC1.24□□□□□ -2.21
RPL28P46779 U8.2-201ENST00000363156 134 ntBASIC1.24□□□□□ -2.21
RPL28P46779 Z98749.2-208ENST00000381646 500 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms