Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FAM206BP-201ENST00000510179 541 ntBASIC0.36□□□□□ -2.35
HTTP42858 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.36□□□□□ -2.35
HTTP42858 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.36□□□□□ -2.35
HTTP42858 AC023824.2-201ENST00000566185 400 ntBASIC0.36□□□□□ -2.35
HTTP42858 AL355816.1-201ENST00000607951 118 ntBASIC0.36□□□□□ -2.35
HTTP42858 Y_RNA.476-201ENST00000384347 108 ntBASIC0.35□□□□□ -2.35
HTTP42858 MIR153-1-201ENST00000384914 90 ntBASIC0.35□□□□□ -2.35
HTTP42858 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
HTTP42858 MIR676-201ENST00000390702 67 ntBASIC0.35□□□□□ -2.35
HTTP42858 OFD1P18Y-201ENST00000420889 959 ntBASIC0.35□□□□□ -2.35
HTTP42858 AC244098.2-201ENST00000422068 99 ntBASIC0.35□□□□□ -2.35
HTTP42858 AL606495.1-201ENST00000422100 813 ntBASIC0.35□□□□□ -2.35
HTTP42858 MTCO1P53-201ENST00000441633 699 ntBASIC0.35□□□□□ -2.35
HTTP42858 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.35□□□□□ -2.35
HTTP42858 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.35□□□□□ -2.35
HTTP42858 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.35□□□□□ -2.35
HTTP42858 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.35□□□□□ -2.35
HTTP42858 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.35□□□□□ -2.35
HTTP42858 AL513475.1-201ENST00000406602 315 ntBASIC0.35□□□□□ -2.35
HTTP42858 MIR1207-201ENST00000408249 87 ntBASIC0.35□□□□□ -2.35
HTTP42858 AC096649.2-201ENST00000416186 393 ntBASIC0.35□□□□□ -2.35
HTTP42858 AL121578.1-201ENST00000428051 892 ntBASIC0.35□□□□□ -2.35
HTTP42858 AC079448.1-201ENST00000449377 373 ntBASIC0.35□□□□□ -2.35
HTTP42858 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.35□□□□□ -2.35
HTTP42858 AC006518.2-201ENST00000542513 940 ntBASIC0.35□□□□□ -2.35
HTTP42858 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.35□□□□□ -2.35
HTTP42858 CYCSP2-201ENST00000558168 301 ntBASIC0.35□□□□□ -2.35
HTTP42858 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.35□□□□□ -2.35
HTTP42858 RNU6-1187P-201ENST00000364771 110 ntBASIC0.35□□□□□ -2.35
HTTP42858 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
HTTP42858 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.35□□□□□ -2.35
HTTP42858 LINC00933-203ENST00000559812 219 ntBASIC0.35□□□□□ -2.35
HTTP42858 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.35□□□□□ -2.35
HTTP42858 SNORA7.2-201ENST00000364446 145 ntBASIC0.34□□□□□ -2.35
HTTP42858 AC245047.4-201ENST00000433189 144 ntBASIC0.34□□□□□ -2.35
HTTP42858 RPS27P22-201ENST00000478056 241 ntBASIC0.34□□□□□ -2.35
HTTP42858 AC109635.4-202ENST00000531666 412 ntBASIC0.34□□□□□ -2.35
HTTP42858 VN1R81P-201ENST00000602085 372 ntBASIC0.34□□□□□ -2.35
HTTP42858 ZNF29P-201ENST00000225587 168 ntBASIC0.34□□□□□ -2.36
HTTP42858 RNU6-225P-201ENST00000384613 103 ntBASIC0.34□□□□□ -2.36
HTTP42858 UBE2V2P3-201ENST00000433562 437 ntBASIC0.34□□□□□ -2.36
HTTP42858 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.34□□□□□ -2.36
HTTP42858 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.34□□□□□ -2.36
HTTP42858 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.34□□□□□ -2.36
HTTP42858 AC112518.2-201ENST00000508565 425 ntBASIC0.34□□□□□ -2.36
HTTP42858 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.34□□□□□ -2.36
HTTP42858 HSBP1P2-201ENST00000299671 229 ntBASIC0.33□□□□□ -2.36
HTTP42858 RNU6-939P-201ENST00000384634 107 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.33□□□□□ -2.36
HTTP42858 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 snoU13.11-201ENST00000459219 104 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC139453.3-201ENST00000493276 369 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.33□□□□□ -2.36
HTTP42858 COL6A4P2-205ENST00000509855 506 ntBASIC0.33□□□□□ -2.36
HTTP42858 AL138726.1-201ENST00000614873 333 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC097372.5-201ENST00000623665 376 ntBASIC0.33□□□□□ -2.36
HTTP42858 RNU4-65P-201ENST00000410473 140 ntBASIC0.33□□□□□ -2.36
HTTP42858 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.33□□□□□ -2.36
HTTP42858 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 PRPS1P1-201ENST00000445305 876 ntBASIC0.33□□□□□ -2.36
HTTP42858 NF1P3-201ENST00000457709 450 ntBASIC0.33□□□□□ -2.36
HTTP42858 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.33□□□□□ -2.36
HTTP42858 AP006587.4-201ENST00000526053 529 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC106800.4-201ENST00000614905 153 ntBASIC0.33□□□□□ -2.36
HTTP42858 MIR604-201ENST00000384880 94 ntBASIC0.33□□□□□ -2.36
HTTP42858 AL356421.1-201ENST00000403255 413 ntBASIC0.33□□□□□ -2.36
HTTP42858 RPL7P30-201ENST00000420888 709 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC097463.2-201ENST00000421074 142 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC010683.1-201ENST00000473673 378 ntBASIC0.33□□□□□ -2.36
HTTP42858 AC023050.1-201ENST00000498198 304 ntBASIC0.33□□□□□ -2.36
HTTP42858 OR6C73P-201ENST00000546432 358 ntBASIC0.33□□□□□ -2.36
HTTP42858 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.33□□□□□ -2.36
HTTP42858 AC040174.2-201ENST00000602701 465 ntBASIC0.33□□□□□ -2.36
HTTP42858 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.33□□□□□ -2.36
HTTP42858 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HTTP42858 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.32□□□□□ -2.36
HTTP42858 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.32□□□□□ -2.36
HTTP42858 AC087588.1-201ENST00000462203 316 ntBASIC0.32□□□□□ -2.36
HTTP42858 MTCO3P35-201ENST00000485582 781 ntBASIC0.32□□□□□ -2.36
HTTP42858 AC243960.4-201ENST00000600532 288 ntBASIC0.32□□□□□ -2.36
HTTP42858 AL109918.3-201ENST00000603072 338 ntBASIC0.32□□□□□ -2.36
HTTP42858 HSPE1P7-201ENST00000604681 321 ntBASIC0.32□□□□□ -2.36
HTTP42858 MIR198-201ENST00000637333 62 ntBASIC0.32□□□□□ -2.36
HTTP42858 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HTTP42858 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HTTP42858 RNU4-7P-201ENST00000364758 141 ntBASIC0.32□□□□□ -2.36
HTTP42858 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
HTTP42858 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.32□□□□□ -2.36
HTTP42858 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.32□□□□□ -2.36
HTTP42858 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.32□□□□□ -2.36
HTTP42858 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.32□□□□□ -2.36
HTTP42858 AP001025.1-201ENST00000486139 332 ntBASIC0.32□□□□□ -2.36
HTTP42858 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.32□□□□□ -2.36
HTTP42858 AC093027.1-201ENST00000546698 429 ntBASIC0.32□□□□□ -2.36
HTTP42858 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.32□□□□□ -2.36
HTTP42858 MTND2P13-201ENST00000577438 1039 ntBASIC0.32□□□□□ -2.36
HTTP42858 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms