Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIK1P39086 AC091905.2-201ENST00000623143 306 ntBASIC4.69□□□□□ -1.66
GRIK1P39086 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIK1P39086 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIK1P39086 Z75746.1-201ENST00000440243 2080 ntBASIC4.69□□□□□ -1.66
GRIK1P39086 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GRIK1P39086 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIK1P39086 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIK1P39086 AC007390.2-201ENST00000606229 3803 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
GRIK1P39086 RNU6-1249P-201ENST00000363237 111 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 Y_RNA.143-201ENST00000363520 106 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RNU6-1284P-201ENST00000363701 100 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RNA5SP28-201ENST00000363841 119 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 U3.15-201ENST00000365398 212 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.68□□□□□ -1.66
GRIK1P39086 SNORD20-201ENST00000384550 80 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 Y_RNA.602-201ENST00000410535 92 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RPS20P14-201ENST00000412545 360 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.68□□□□□ -1.66
GRIK1P39086 AL159987.2-201ENST00000432754 307 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.68□□□□□ -1.66
GRIK1P39086 NUTF2P3-201ENST00000448540 384 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.68□□□□□ -1.66
GRIK1P39086 AL513124.1-201ENST00000450410 614 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.68□□□□□ -1.66
GRIK1P39086 AC087190.1-201ENST00000484462 480 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC107032.1-201ENST00000485945 480 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RPS23P5-201ENST00000495419 428 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RPL7P47-201ENST00000497299 556 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC074250.1-201ENST00000511117 192 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 RNU6-911P-201ENST00000516523 104 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIK1P39086 TOMM20P2-201ENST00000540082 421 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 MIR5701-3-201ENST00000578890 82 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC023575.1-201ENST00000580510 358 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 MIR5701-1-201ENST00000585138 82 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AL365222.1-201ENST00000614661 98 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 MIR5701-2-201ENST00000615634 82 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.68□□□□□ -1.66
GRIK1P39086 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIK1P39086 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.68□□□□□ -1.66
GRIK1P39086 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
GRIK1P39086 BX322639.1-202ENST00000423987 2213 ntBASIC4.68□□□□□ -1.66
GRIK1P39086 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GRIK1P39086 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
GRIK1P39086 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIK1P39086 AC092435.4-201ENST00000623012 4159 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIK1P39086 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 MIR331-201ENST00000362302 94 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 Y_RNA.304-201ENST00000365011 112 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU1-63P-201ENST00000383902 164 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
GRIK1P39086 MIR921-201ENST00000401133 56 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 LAP3P1-201ENST00000403648 294 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU6-394P-201ENST00000410735 107 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU6-651P-201ENST00000411040 105 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RPS23P10-201ENST00000416185 486 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 BX842559.1-201ENST00000419615 532 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AC004866.2-201ENST00000438285 481 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 DAP3P1-201ENST00000441522 278 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.67□□□□□ -1.66
GRIK1P39086 AC010631.1-201ENST00000474150 156 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.67□□□□□ -1.66
GRIK1P39086 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.67□□□□□ -1.66
GRIK1P39086 ACA59.1-201ENST00000515966 143 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU6-1095P-201ENST00000516148 108 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU6-313P-201ENST00000516317 112 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 RNU6-479P-201ENST00000516348 105 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.67□□□□□ -1.66
GRIK1P39086 AC120057.2-201ENST00000571520 271 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.67□□□□□ -1.66
GRIK1P39086 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.67□□□□□ -1.66
GRIK1P39086 AL670379.6-201ENST00000603753 252 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL670379.1-201ENST00000604752 252 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL670379.5-201ENST00000605253 252 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL670379.8-201ENST00000605353 252 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL670379.7-201ENST00000605823 252 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL591516.1-201ENST00000611326 274 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.67□□□□□ -1.66
GRIK1P39086 LINC00901.1-201ENST00000617252 152 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 uc_338.13-201ENST00000618243 179 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 U6.92-201ENST00000636464 89 ntBASIC4.67□□□□□ -1.66
GRIK1P39086 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIK1P39086 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIK1P39086 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIK1P39086 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIK1P39086 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIK1P39086 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.66□□□□□ -1.66
GRIK1P39086 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GRIK1P39086 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
GRIK1P39086 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms