Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM23P36406 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -2
TRIM23P36406 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM23P36406 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
TRIM23P36406 FGF7P2-201ENST00000332473 296 ntBASIC2.58□□□□□ -2
TRIM23P36406 RNU4-1-201ENST00000363925 141 ntBASIC2.58□□□□□ -2
TRIM23P36406 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
TRIM23P36406 RNY4P16-201ENST00000364768 94 ntBASIC2.58□□□□□ -2
TRIM23P36406 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.58□□□□□ -2
TRIM23P36406 SNORA26.8-201ENST00000391306 124 ntBASIC2.58□□□□□ -2
TRIM23P36406 AL139039.1-201ENST00000401900 692 ntBASIC2.58□□□□□ -2
TRIM23P36406 NPM1P11-201ENST00000417106 855 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.58□□□□□ -2
TRIM23P36406 MTND1P28-201ENST00000435623 950 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC011816.1-201ENST00000441346 546 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
TRIM23P36406 NDUFB4P2-201ENST00000509515 391 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC113155.1-201ENST00000511141 769 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC114781.4-201ENST00000513707 639 ntBASIC2.58□□□□□ -2
TRIM23P36406 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
TRIM23P36406 RNU6-1092P-201ENST00000516955 87 ntBASIC2.58□□□□□ -2
TRIM23P36406 MTND2P38-201ENST00000522536 667 ntBASIC2.58□□□□□ -2
TRIM23P36406 AP003122.4-201ENST00000530980 758 ntBASIC2.58□□□□□ -2
TRIM23P36406 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.58□□□□□ -2
TRIM23P36406 AC243972.3-201ENST00000539655 198 ntBASIC2.58□□□□□ -2
TRIM23P36406 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.58□□□□□ -2
TRIM23P36406 AC009977.1-201ENST00000586015 570 ntBASIC2.58□□□□□ -2
TRIM23P36406 BNIP3P8-201ENST00000597863 560 ntBASIC2.58□□□□□ -2
TRIM23P36406 Z99497.2-201ENST00000603634 310 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC098826.3-201ENST00000603823 466 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC068276.1-201ENST00000605793 379 ntBASIC2.58□□□□□ -2
TRIM23P36406 AL603839.4-201ENST00000624658 1005 ntBASIC2.58□□□□□ -2
TRIM23P36406 AC243829.7-201ENST00000633081 225 ntBASIC2.58□□□□□ -2
TRIM23P36406 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.58□□□□□ -2
TRIM23P36406 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TRIM23P36406 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM23P36406 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
TRIM23P36406 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM23P36406 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM23P36406 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM23P36406 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
TRIM23P36406 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
TRIM23P36406 RNU6-14P-201ENST00000384630 106 ntBASIC2.57□□□□□ -2
TRIM23P36406 RPL23AP32-201ENST00000395315 459 ntBASIC2.57□□□□□ -2
TRIM23P36406 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 AL021407.1-201ENST00000404531 386 ntBASIC2.57□□□□□ -2
TRIM23P36406 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
TRIM23P36406 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.57□□□□□ -2
TRIM23P36406 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.57□□□□□ -2
TRIM23P36406 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 RPS15AP5-201ENST00000436276 388 ntBASIC2.57□□□□□ -2
TRIM23P36406 SNRPEP9-201ENST00000436794 238 ntBASIC2.57□□□□□ -2
TRIM23P36406 FABP5P15-201ENST00000453566 214 ntBASIC2.57□□□□□ -2
TRIM23P36406 RNU6-953P-201ENST00000459154 107 ntBASIC2.57□□□□□ -2
TRIM23P36406 snoU109.1-201ENST00000459339 135 ntBASIC2.57□□□□□ -2
TRIM23P36406 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
TRIM23P36406 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
TRIM23P36406 AC105252.1-201ENST00000503089 286 ntBASIC2.57□□□□□ -2
TRIM23P36406 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
TRIM23P36406 AC010486.3-201ENST00000511602 785 ntBASIC2.57□□□□□ -2
TRIM23P36406 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
TRIM23P36406 HMGB1P41-201ENST00000520234 440 ntBASIC2.57□□□□□ -2
TRIM23P36406 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.57□□□□□ -2
TRIM23P36406 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 AC104763.2-201ENST00000604179 382 ntBASIC2.57□□□□□ -2
TRIM23P36406 AL161798.1-201ENST00000604630 131 ntBASIC2.57□□□□□ -2
TRIM23P36406 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 AL365204.3-201ENST00000612448 685 ntBASIC2.57□□□□□ -2
TRIM23P36406 AC006338.1-201ENST00000618453 749 ntBASIC2.57□□□□□ -2
TRIM23P36406 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 MIR3974-201ENST00000637126 96 ntBASIC2.57□□□□□ -2
TRIM23P36406 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRIM23P36406 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
TRIM23P36406 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TRIM23P36406 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
TRIM23P36406 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM23P36406 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
TRIM23P36406 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM23P36406 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
TRIM23P36406 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
TRIM23P36406 AL139397.2-201ENST00000404529 772 ntBASIC2.56□□□□□ -2
TRIM23P36406 USP9YP20-201ENST00000419224 558 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC090960.1-201ENST00000421072 306 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.56□□□□□ -2
TRIM23P36406 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
TRIM23P36406 AC104651.1-201ENST00000427559 735 ntBASIC2.56□□□□□ -2
TRIM23P36406 HMGB1P9-201ENST00000429856 646 ntBASIC2.56□□□□□ -2
TRIM23P36406 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.56□□□□□ -2
TRIM23P36406 AC098826.1-201ENST00000433943 471 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC119618.1-201ENST00000434191 222 ntBASIC2.56□□□□□ -2
TRIM23P36406 MTND6P13-201ENST00000443510 523 ntBASIC2.56□□□□□ -2
TRIM23P36406 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.56□□□□□ -2
TRIM23P36406 AL033528.1-201ENST00000453780 140 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms