Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.17□□□□□ -2.22
SDC4P31431 AC084024.2-201ENST00000503480 791 ntBASIC1.17□□□□□ -2.22
SDC4P31431 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.17□□□□□ -2.22
SDC4P31431 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.17□□□□□ -2.22
SDC4P31431 AC034114.1-201ENST00000520293 285 ntBASIC1.17□□□□□ -2.22
SDC4P31431 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.17□□□□□ -2.22
SDC4P31431 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.17□□□□□ -2.22
SDC4P31431 AC009974.1-201ENST00000608881 455 ntBASIC1.17□□□□□ -2.22
SDC4P31431 AC013476.2-201ENST00000614456 459 ntBASIC1.17□□□□□ -2.22
SDC4P31431 AC097655.1-201ENST00000635075 318 ntBASIC1.17□□□□□ -2.22
SDC4P31431 MIR3199-2-201ENST00000636243 86 ntBASIC1.17□□□□□ -2.22
SDC4P31431 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
SDC4P31431 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SDC4P31431 RNU6-40P-201ENST00000384254 107 ntBASIC1.16□□□□□ -2.22
SDC4P31431 MIR30A-201ENST00000385092 71 ntBASIC1.16□□□□□ -2.22
SDC4P31431 MIR16-1-201ENST00000385271 89 ntBASIC1.16□□□□□ -2.22
SDC4P31431 USP9YP19-201ENST00000412165 485 ntBASIC1.16□□□□□ -2.22
SDC4P31431 USP9YP13-201ENST00000417797 480 ntBASIC1.16□□□□□ -2.22
SDC4P31431 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.16□□□□□ -2.22
SDC4P31431 AC092170.1-201ENST00000440211 356 ntBASIC1.16□□□□□ -2.22
SDC4P31431 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.16□□□□□ -2.22
SDC4P31431 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.16□□□□□ -2.22
SDC4P31431 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SDC4P31431 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SDC4P31431 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.16□□□□□ -2.22
SDC4P31431 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SDC4P31431 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.16□□□□□ -2.22
SDC4P31431 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.16□□□□□ -2.22
SDC4P31431 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
SDC4P31431 AC025918.2-201ENST00000558683 763 ntBASIC1.16□□□□□ -2.22
SDC4P31431 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.16□□□□□ -2.22
SDC4P31431 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.16□□□□□ -2.22
SDC4P31431 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.16□□□□□ -2.22
SDC4P31431 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.16□□□□□ -2.22
SDC4P31431 AC087821.2-201ENST00000637086 450 ntBASIC1.16□□□□□ -2.22
SDC4P31431 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.15□□□□□ -2.23
SDC4P31431 Y_RNA.327-201ENST00000365201 102 ntBASIC1.15□□□□□ -2.23
SDC4P31431 MIR95-201ENST00000385072 81 ntBASIC1.15□□□□□ -2.23
SDC4P31431 TMSB4XP8-201ENST00000402089 135 ntBASIC1.15□□□□□ -2.23
SDC4P31431 OR6C66P-201ENST00000414917 930 ntBASIC1.15□□□□□ -2.23
SDC4P31431 TMSB4XP6-201ENST00000415187 135 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AL449283.1-202ENST00000418249 604 ntBASIC1.15□□□□□ -2.23
SDC4P31431 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.15□□□□□ -2.23
SDC4P31431 TMSB4XP1-201ENST00000424567 135 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC007919.1-201ENST00000429380 217 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC092473.1-201ENST00000441098 221 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AL050341.1-201ENST00000447743 313 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.15□□□□□ -2.23
SDC4P31431 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.15□□□□□ -2.23
SDC4P31431 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.15□□□□□ -2.23
SDC4P31431 AC026271.5-201ENST00000577873 130 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.15□□□□□ -2.23
SDC4P31431 AC009032.1-201ENST00000617574 431 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AP003476.1-201ENST00000623984 516 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.15□□□□□ -2.23
SDC4P31431 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
SDC4P31431 MTCO1P9-201ENST00000505577 1534 ntBASIC1.15□□□□□ -2.23
SDC4P31431 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.14□□□□□ -2.23
SDC4P31431 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.14□□□□□ -2.23
SDC4P31431 AC008850.1-201ENST00000427546 362 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.14□□□□□ -2.23
SDC4P31431 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.14□□□□□ -2.23
SDC4P31431 AC241584.1-201ENST00000438469 1241 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AL603825.1-201ENST00000438481 80 ntBASIC1.14□□□□□ -2.23
SDC4P31431 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.14□□□□□ -2.23
SDC4P31431 PTENP1-201ENST00000447117 1215 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AL353691.1-201ENST00000451332 387 ntBASIC1.14□□□□□ -2.23
SDC4P31431 SUMO2P2-201ENST00000456482 255 ntBASIC1.14□□□□□ -2.23
SDC4P31431 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
SDC4P31431 RPL22P13-201ENST00000493291 347 ntBASIC1.14□□□□□ -2.23
SDC4P31431 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.14□□□□□ -2.23
SDC4P31431 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.14□□□□□ -2.23
SDC4P31431 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.14□□□□□ -2.23
SDC4P31431 AC006199.1-201ENST00000548728 219 ntBASIC1.14□□□□□ -2.23
SDC4P31431 RRN3P3-201ENST00000549207 578 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.14□□□□□ -2.23
SDC4P31431 AP001004.1-201ENST00000582468 324 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.14□□□□□ -2.23
SDC4P31431 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.14□□□□□ -2.23
SDC4P31431 AC092140.2-201ENST00000618027 521 ntBASIC1.14□□□□□ -2.23
SDC4P31431 MTND5P11-201ENST00000511037 1812 ntBASIC1.14□□□□□ -2.23
SDC4P31431 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SDC4P31431 SNORA25B-201ENST00000365507 128 ntBASIC1.13□□□□□ -2.23
SDC4P31431 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
SDC4P31431 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC009310.1-201ENST00000414414 451 ntBASIC1.13□□□□□ -2.23
SDC4P31431 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SDC4P31431 SFR1P2-201ENST00000421841 730 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AL160275.3-201ENST00000423876 471 ntBASIC1.13□□□□□ -2.23
SDC4P31431 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.13□□□□□ -2.23
SDC4P31431 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.13□□□□□ -2.23
SDC4P31431 USP9YP34-201ENST00000453983 808 ntBASIC1.13□□□□□ -2.23
SDC4P31431 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.13□□□□□ -2.23
SDC4P31431 RPS20P20-201ENST00000460498 340 ntBASIC1.13□□□□□ -2.23
SDC4P31431 AC092902.1-201ENST00000486999 259 ntBASIC1.13□□□□□ -2.23
SDC4P31431 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.13□□□□□ -2.23
SDC4P31431 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.13□□□□□ -2.23
SDC4P31431 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SDC4P31431 EIF1AXP2-201ENST00000555940 413 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms