Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC016925.2-201ENST00000605108 242 ntBASIC0.76□□□□□ -2.29
CPS1P31327 MIR7515-201ENST00000637837 67 ntBASIC0.76□□□□□ -2.29
CPS1P31327 SNORA63.3-201ENST00000362682 132 ntBASIC0.75□□□□□ -2.29
CPS1P31327 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CPS1P31327 MIR515-2-201ENST00000384883 83 ntBASIC0.75□□□□□ -2.29
CPS1P31327 MIR515-1-201ENST00000384884 83 ntBASIC0.75□□□□□ -2.29
CPS1P31327 MIR618-201ENST00000385287 98 ntBASIC0.75□□□□□ -2.29
CPS1P31327 PIGPP2-201ENST00000411569 458 ntBASIC0.75□□□□□ -2.29
CPS1P31327 VN1R42P-201ENST00000424651 344 ntBASIC0.75□□□□□ -2.29
CPS1P31327 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.75□□□□□ -2.29
CPS1P31327 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CPS1P31327 FAM206BP-201ENST00000510179 541 ntBASIC0.75□□□□□ -2.29
CPS1P31327 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.75□□□□□ -2.29
CPS1P31327 AC004817.2-201ENST00000561794 651 ntBASIC0.75□□□□□ -2.29
CPS1P31327 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.75□□□□□ -2.29
CPS1P31327 HSPE1P19-201ENST00000603327 295 ntBASIC0.75□□□□□ -2.29
CPS1P31327 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
CPS1P31327 MIR329-2-201ENST00000385029 84 ntBASIC0.74□□□□□ -2.29
CPS1P31327 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.74□□□□□ -2.29
CPS1P31327 Z99497.1-201ENST00000421282 135 ntBASIC0.74□□□□□ -2.29
CPS1P31327 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.74□□□□□ -2.29
CPS1P31327 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.74□□□□□ -2.29
CPS1P31327 AC010620.1-201ENST00000601088 1102 ntBASIC0.74□□□□□ -2.29
CPS1P31327 AC087045.1-201ENST00000605856 382 ntBASIC0.74□□□□□ -2.29
CPS1P31327 LINC02211-204ENST00000642024 1070 ntBASIC0.74□□□□□ -2.29
CPS1P31327 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CPS1P31327 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CPS1P31327 SNRPEP3-201ENST00000338402 276 ntBASIC0.74□□□□□ -2.29
CPS1P31327 AL591043.1-201ENST00000432461 424 ntBASIC0.74□□□□□ -2.29
CPS1P31327 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.74□□□□□ -2.29
CPS1P31327 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.74□□□□□ -2.29
CPS1P31327 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.74□□□□□ -2.29
CPS1P31327 LINC00557-201ENST00000563184 1279 ntBASIC0.74□□□□□ -2.29
CPS1P31327 MIR5571-201ENST00000577998 113 ntBASIC0.74□□□□□ -2.29
CPS1P31327 MIR4636-201ENST00000582271 80 ntBASIC0.74□□□□□ -2.29
CPS1P31327 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.74□□□□□ -2.29
CPS1P31327 AP002791.1-201ENST00000623291 381 ntBASIC0.74□□□□□ -2.29
CPS1P31327 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
CPS1P31327 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CPS1P31327 RNU4-67P-201ENST00000364569 141 ntBASIC0.73□□□□□ -2.29
CPS1P31327 AP003497.1-201ENST00000528472 562 ntBASIC0.73□□□□□ -2.29
CPS1P31327 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.73□□□□□ -2.29
CPS1P31327 MIR3198-2-201ENST00000577868 80 ntBASIC0.73□□□□□ -2.29
CPS1P31327 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.73□□□□□ -2.29
CPS1P31327 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
CPS1P31327 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.72□□□□□ -2.29
CPS1P31327 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.72□□□□□ -2.29
CPS1P31327 RPS15AP40-201ENST00000419621 391 ntBASIC0.72□□□□□ -2.29
CPS1P31327 TMEM167AP1-201ENST00000423409 219 ntBASIC0.72□□□□□ -2.29
CPS1P31327 AL645638.1-201ENST00000440519 361 ntBASIC0.72□□□□□ -2.29
CPS1P31327 RPL26P9-201ENST00000457466 433 ntBASIC0.72□□□□□ -2.29
CPS1P31327 MRPS36P2-201ENST00000512569 299 ntBASIC0.72□□□□□ -2.29
CPS1P31327 SNORA31.8-201ENST00000516327 108 ntBASIC0.72□□□□□ -2.29
CPS1P31327 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.72□□□□□ -2.29
CPS1P31327 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.72□□□□□ -2.29
CPS1P31327 AL078605.1-201ENST00000603529 500 ntBASIC0.72□□□□□ -2.29
CPS1P31327 AC009974.1-201ENST00000608881 455 ntBASIC0.72□□□□□ -2.29
CPS1P31327 AC019131.2-201ENST00000609071 870 ntBASIC0.72□□□□□ -2.29
CPS1P31327 AC090132.2-201ENST00000615881 347 ntBASIC0.72□□□□□ -2.29
CPS1P31327 MTND5P11-201ENST00000511037 1812 ntBASIC0.71□□□□□ -2.3
CPS1P31327 Y_RNA.303-201ENST00000364998 94 ntBASIC0.71□□□□□ -2.3
CPS1P31327 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
CPS1P31327 RNU6-220P-201ENST00000390919 107 ntBASIC0.71□□□□□ -2.3
CPS1P31327 AC098592.2-201ENST00000413158 265 ntBASIC0.71□□□□□ -2.3
CPS1P31327 HMGB3P31-201ENST00000413333 595 ntBASIC0.71□□□□□ -2.3
CPS1P31327 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.71□□□□□ -2.3
CPS1P31327 DYNLT3P2-201ENST00000442517 295 ntBASIC0.71□□□□□ -2.3
CPS1P31327 LDHBP3-201ENST00000514909 822 ntBASIC0.71□□□□□ -2.3
CPS1P31327 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.71□□□□□ -2.3
CPS1P31327 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.71□□□□□ -2.3
CPS1P31327 AC021749.1-201ENST00000604322 607 ntBASIC0.71□□□□□ -2.3
CPS1P31327 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CPS1P31327 MIR6864-201ENST00000617935 70 ntBASIC0.71□□□□□ -2.3
CPS1P31327 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CPS1P31327 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.7□□□□□ -2.3
CPS1P31327 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.7□□□□□ -2.3
CPS1P31327 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.7□□□□□ -2.3
CPS1P31327 BX248409.1-201ENST00000455497 255 ntBASIC0.7□□□□□ -2.3
CPS1P31327 AC087588.1-201ENST00000462203 316 ntBASIC0.7□□□□□ -2.3
CPS1P31327 RNU6-362P-201ENST00000516736 90 ntBASIC0.7□□□□□ -2.3
CPS1P31327 AC106900.2-201ENST00000604994 317 ntBASIC0.7□□□□□ -2.3
CPS1P31327 AL355810.1-201ENST00000614629 552 ntBASIC0.7□□□□□ -2.3
CPS1P31327 AC068787.1-201ENST00000623908 691 ntBASIC0.7□□□□□ -2.3
CPS1P31327 AC091925.2-201ENST00000625059 256 ntBASIC0.7□□□□□ -2.3
CPS1P31327 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CPS1P31327 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CPS1P31327 RNA5SP391-201ENST00000363456 119 ntBASIC0.69□□□□□ -2.3
CPS1P31327 RNU6-338P-201ENST00000383888 105 ntBASIC0.69□□□□□ -2.3
CPS1P31327 Y_RNA.549-201ENST00000384657 102 ntBASIC0.69□□□□□ -2.3
CPS1P31327 U3.29-201ENST00000391296 212 ntBASIC0.69□□□□□ -2.3
CPS1P31327 RNA5SP25-201ENST00000410815 110 ntBASIC0.69□□□□□ -2.3
CPS1P31327 AC241584.1-201ENST00000438469 1241 ntBASIC0.69□□□□□ -2.3
CPS1P31327 Z82190.1-201ENST00000454534 490 ntBASIC0.69□□□□□ -2.3
CPS1P31327 AC107626.1-201ENST00000471084 183 ntBASIC0.69□□□□□ -2.3
CPS1P31327 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
CPS1P31327 SNORA25.8-201ENST00000364831 128 ntBASIC0.69□□□□□ -2.3
CPS1P31327 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.69□□□□□ -2.3
CPS1P31327 RNA5SP299-201ENST00000391203 116 ntBASIC0.69□□□□□ -2.3
CPS1P31327 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CPS1P31327 AC093106.2-201ENST00000428212 385 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms