Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC015871.2-201ENST00000603605 948 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 AC009994.1-201ENST00000606889 253 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 OR10AB1P-201ENST00000609613 938 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 AC013412.1-201ENST00000610687 192 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 AL121757.2-201ENST00000611223 313 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.17□□□□□ -1.9
HOXC13P31276 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC13P31276 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
HOXC13P31276 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC13P31276 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC13P31276 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC13P31276 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC13P31276 RNA5SP432-201ENST00000362480 116 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 RNU6-660P-201ENST00000364566 109 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 RNU6-259P-201ENST00000383999 107 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 SNORA18.3-201ENST00000384122 132 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 RNU6-217P-201ENST00000384164 104 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 MIR1277-201ENST00000408536 78 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AL592148.1-201ENST00000413568 445 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC13P31276 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC13P31276 USP9YP18-201ENST00000425912 695 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC13P31276 RPL37P21-201ENST00000435890 276 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 HMGB1P31-201ENST00000437242 427 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 MTND3P10-201ENST00000450967 341 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 AC010631.1-201ENST00000474150 156 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC079382.1-201ENST00000493346 557 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC008628.2-201ENST00000502605 298 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 FAM92A1P2-202ENST00000504766 877 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 ARL2BPP4-201ENST00000506854 471 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC13P31276 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC13P31276 RNU6-314P-201ENST00000516574 104 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 AC123904.3-201ENST00000547218 814 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC093012.1-202ENST00000549403 582 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC13P31276 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXC13P31276 MIR3945-201ENST00000581853 98 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC005730.3-201ENST00000583067 366 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 MIR3616-201ENST00000584070 92 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 AC068276.1-201ENST00000605793 379 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 U4.5-201ENST00000617137 123 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXC13P31276 MTND1P37-201ENST00000636562 264 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.16□□□□□ -1.9
HOXC13P31276 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXC13P31276 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC13P31276 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC13P31276 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
HOXC13P31276 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXC13P31276 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HOXC13P31276 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC13P31276 Y_RNA.256-201ENST00000364594 104 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 RNU6-116P-201ENST00000384042 109 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC13P31276 Z99497.1-201ENST00000421282 135 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC13P31276 RPL7P37-201ENST00000425095 738 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 NFU1P2-201ENST00000448700 469 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC13P31276 RN7SL20P-201ENST00000488827 297 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC13P31276 AC046134.1-201ENST00000514454 666 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC022634.1-201ENST00000520765 532 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC13P31276 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC13P31276 DEFB108A-201ENST00000530110 222 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC13P31276 AC092354.1-201ENST00000606057 376 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AL627309.6-201ENST00000606857 840 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AC064836.2-201ENST00000609491 462 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 AL589743.7-201ENST00000612637 233 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC13P31276 AC104260.1-201ENST00000616660 539 ntBASIC3.15□□□□□ -1.91
HOXC13P31276 MTND4P12-201ENST00000498999 1377 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXC13P31276 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC13P31276 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC13P31276 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC13P31276 RNU6-500P-201ENST00000362349 107 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RNU4-76P-201ENST00000364509 141 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RNU4-12P-201ENST00000365233 139 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms