Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
POLR2AP24928 AL356057.3-201ENST00000402607 340 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 Y_RNA.618-201ENST00000410949 107 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 FABP5P14-201ENST00000437273 393 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RPL7L1P1-201ENST00000448259 785 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AC022431.1-201ENST00000450941 438 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 TRBV1-201ENST00000476502 284 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AC092436.1-201ENST00000506450 503 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RNU6-273P-201ENST00000516937 96 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 SNORA25.17-201ENST00000517184 124 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AC009812.2-201ENST00000517657 457 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 AL358913.1-201ENST00000554342 121 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 MIR4319-201ENST00000577285 85 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 MIR3945-201ENST00000581853 98 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
POLR2AP24928 AC007792.1-201ENST00000623023 402 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
POLR2AP24928 LINC01355-201ENST00000566551 5444 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
POLR2AP24928 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
POLR2AP24928 AL137003.2-201ENST00000606924 2538 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
POLR2AP24928 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 RNU6-97P-201ENST00000363387 104 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 Y_RNA.493-201ENST00000384422 102 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 RNU2-21P-201ENST00000410368 188 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 RNU6-370P-201ENST00000411008 104 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 SKA2P1-201ENST00000425592 390 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC239809.1-201ENST00000450470 217 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AL135752.1-201ENST00000479477 471 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.78□□□□□ -1.8
POLR2AP24928 IMMP1LP2-201ENST00000552954 492 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AL118558.2-201ENST00000556294 238 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 MIR4775-201ENST00000581168 75 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 NF1P5-201ENST00000588287 448 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AC005357.1-201ENST00000588399 301 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR2AP24928 BDH2P1-201ENST00000602288 736 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
POLR2AP24928 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
POLR2AP24928 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.78□□□□□ -1.8
POLR2AP24928 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
POLR2AP24928 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
POLR2AP24928 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
POLR2AP24928 OR1S2-201ENST00000302592 978 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 RNY4P16-201ENST00000364768 94 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 Y_RNA.404-201ENST00000383978 102 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 Y_RNA.576-201ENST00000384781 102 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 Y_RNA.645-201ENST00000391229 102 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AL360182.1-201ENST00000397433 468 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC008267.5-201ENST00000424928 265 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR2AP24928 RNU1-41P-201ENST00000516161 162 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 RNU1-48P-201ENST00000516400 162 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
POLR2AP24928 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.78□□□□□ -1.8
POLR2AP24928 AC012409.4-201ENST00000612923 249 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
POLR2AP24928 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
POLR2AP24928 PHKBP1-201ENST00000450951 1951 ntBASIC3.78□□□□□ -1.8
POLR2AP24928 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
POLR2AP24928 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
POLR2AP24928 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR2AP24928 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
POLR2AP24928 AC000123.3-201ENST00000624029 4975 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
POLR2AP24928 LINC02471-203ENST00000641941 4752 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
POLR2AP24928 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
POLR2AP24928 AC027287.1-201ENST00000553115 1453 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
POLR2AP24928 RNU6-463P-201ENST00000384340 107 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 AC016769.3-201ENST00000396562 315 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 RN7SKP247-201ENST00000411094 308 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 RPL30P2-201ENST00000414021 291 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR2AP24928 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR2AP24928 AL138799.3-201ENST00000438968 350 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 Z98949.2-201ENST00000440996 144 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 AL135938.1-201ENST00000443141 297 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 AL589765.3-201ENST00000446084 462 ntBASIC3.77□□□□□ -1.81
POLR2AP24928 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms