Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
MMP11P24347 MIR7157-201ENST00000635801 60 ntBASIC2.28□□□□□ -2.04
MMP11P24347 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MMP11P24347 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
MMP11P24347 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.28□□□□□ -2.05
MMP11P24347 NACAP2-201ENST00000318548 624 ntBASIC2.27□□□□□ -2.05
MMP11P24347 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
MMP11P24347 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AL135786.1-201ENST00000415892 214 ntBASIC2.27□□□□□ -2.05
MMP11P24347 HIGD1AP15-201ENST00000416198 280 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 MTND4P25-201ENST00000441039 533 ntBASIC2.27□□□□□ -2.05
MMP11P24347 HIGD1AP2-201ENST00000446367 280 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 LINC00888-204ENST00000487386 421 ntBASIC2.27□□□□□ -2.05
MMP11P24347 RPL39P36-201ENST00000490784 156 ntBASIC2.27□□□□□ -2.05
MMP11P24347 RNU6-415P-201ENST00000516252 97 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 OR4R1P-201ENST00000529879 463 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC021269.2-201ENST00000532318 330 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC123904.2-201ENST00000548059 300 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC006199.1-201ENST00000548728 219 ntBASIC2.27□□□□□ -2.05
MMP11P24347 PCMTD1P2-201ENST00000565017 355 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP11P24347 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.27□□□□□ -2.05
MMP11P24347 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP11P24347 AC022022.2-201ENST00000602989 360 ntBASIC2.27□□□□□ -2.05
MMP11P24347 BNIP3P9-201ENST00000603714 553 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AL358072.1-201ENST00000604156 575 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC104763.2-201ENST00000604179 382 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AL049779.4-201ENST00000604500 156 ntBASIC2.27□□□□□ -2.05
MMP11P24347 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP11P24347 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.27□□□□□ -2.05
MMP11P24347 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.27□□□□□ -2.05
MMP11P24347 MTND5P30-201ENST00000452896 1731 ntBASIC2.27□□□□□ -2.05
MMP11P24347 ZNF658B-202ENST00000615961 3375 ntBASIC2.27□□□□□ -2.05
MMP11P24347 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
MMP11P24347 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP11P24347 AC131280.1-202ENST00000624067 4211 ntBASIC2.26□□□□□ -2.05
MMP11P24347 MTND4P27-201ENST00000450813 1354 ntBASIC2.26□□□□□ -2.05
MMP11P24347 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MMP11P24347 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP11P24347 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.26□□□□□ -2.05
MMP11P24347 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP11P24347 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
MMP11P24347 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.26□□□□□ -2.05
MMP11P24347 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.26□□□□□ -2.05
MMP11P24347 AC098826.1-201ENST00000433943 471 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 GDI2P2-201ENST00000445131 608 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 AC073901.1-201ENST00000462471 408 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC112204.1-201ENST00000502591 103 ntBASIC2.26□□□□□ -2.05
MMP11P24347 GZMAP1-201ENST00000503054 631 ntBASIC2.26□□□□□ -2.05
MMP11P24347 RNU1-41P-201ENST00000516161 162 ntBASIC2.26□□□□□ -2.05
MMP11P24347 RNU1-48P-201ENST00000516400 162 ntBASIC2.26□□□□□ -2.05
MMP11P24347 RN7SKP265-201ENST00000516448 223 ntBASIC2.26□□□□□ -2.05
MMP11P24347 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
MMP11P24347 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 MTND4LP18-201ENST00000526864 291 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC011979.2-201ENST00000527568 352 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP11P24347 AP001981.2-201ENST00000603241 418 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AL645944.1-201ENST00000603857 493 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
MMP11P24347 AC108747.1-201ENST00000609508 535 ntBASIC2.26□□□□□ -2.05
MMP11P24347 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
MMP11P24347 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.26□□□□□ -2.05
MMP11P24347 FO624990.1-201ENST00000636373 85 ntBASIC2.26□□□□□ -2.05
MMP11P24347 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.26□□□□□ -2.05
MMP11P24347 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
MMP11P24347 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.26□□□□□ -2.05
MMP11P24347 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
MMP11P24347 AC104454.1-201ENST00000421341 1401 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AC092104.1-201ENST00000497346 1441 ntBASIC2.25□□□□□ -2.05
MMP11P24347 MTND4P35-201ENST00000604257 1375 ntBASIC2.25□□□□□ -2.05
MMP11P24347 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
MMP11P24347 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.25□□□□□ -2.05
MMP11P24347 RNU6-501P-201ENST00000364072 100 ntBASIC2.25□□□□□ -2.05
MMP11P24347 RNU1-138P-201ENST00000384093 164 ntBASIC2.25□□□□□ -2.05
MMP11P24347 RNU6-809P-201ENST00000384461 107 ntBASIC2.25□□□□□ -2.05
MMP11P24347 RNU6-14P-201ENST00000384630 106 ntBASIC2.25□□□□□ -2.05
MMP11P24347 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
MMP11P24347 USP9YP6-201ENST00000413550 854 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.25□□□□□ -2.05
MMP11P24347 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
MMP11P24347 MICF-203ENST00000432679 129 ntBASIC2.25□□□□□ -2.05
MMP11P24347 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
MMP11P24347 UBE2D3P1-201ENST00000436669 444 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AL008629.1-201ENST00000438615 184 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AL161651.1-201ENST00000440882 223 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AC118469.1-201ENST00000442943 488 ntBASIC2.25□□□□□ -2.05
MMP11P24347 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms