Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 RNA5SP361-201ENST00000362686 118 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 RNU6-527P-201ENST00000363425 104 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 RN7SKP224-201ENST00000364140 325 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 RN7SKP153-201ENST00000365026 316 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 Y_RNA.435-201ENST00000384095 112 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 RNU6-804P-201ENST00000384286 107 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 SNORA46.1-201ENST00000391069 153 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AL078599.1-201ENST00000402075 293 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 U3.37-201ENST00000408528 213 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA1P21709 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.39□□□□□ -1.71
EPHA1P21709 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 GAPDHP25-201ENST00000447061 1001 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 NUTF2P3-201ENST00000448540 384 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 NUTF2P7-201ENST00000453086 375 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC117440.1-201ENST00000474107 571 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 RPL26P26-201ENST00000480251 434 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA1P21709 AL132838.2-201ENST00000492041 314 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AF186996.7-201ENST00000492781 209 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 MTND5P41-201ENST00000517498 206 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.39□□□□□ -1.71
EPHA1P21709 AP004607.1-201ENST00000524456 203 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 MRPS18CP4-201ENST00000535821 231 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC024940.3-201ENST00000538551 316 ntBASIC4.39□□□□□ -1.71
EPHA1P21709 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA1P21709 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA1P21709 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA1P21709 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA1P21709 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA1P21709 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA1P21709 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA1P21709 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.39□□□□□ -1.71
EPHA1P21709 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
EPHA1P21709 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
EPHA1P21709 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 MIR410-201ENST00000362222 80 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 Y_RNA.570-201ENST00000384750 101 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 MIR105-1-201ENST00000385222 81 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHA1P21709 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHA1P21709 RNA5SP31-201ENST00000411144 127 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA1P21709 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA1P21709 PSMD10P3-201ENST00000437000 448 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA1P21709 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA1P21709 AC087477.1-201ENST00000465747 340 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 AC091959.1-201ENST00000495857 238 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 AC108043.1-201ENST00000512696 574 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 SNORA43.2-201ENST00000516652 128 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA1P21709 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA1P21709 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHA1P21709 RN7SL356P-201ENST00000582228 248 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 AC024153.1-201ENST00000603103 365 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 U6.99-201ENST00000637524 83 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHA1P21709 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHA1P21709 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA1P21709 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHA1P21709 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA1P21709 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
EPHA1P21709 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
EPHA1P21709 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
EPHA1P21709 SAMMSON-226ENST00000642089 1582 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
EPHA1P21709 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EPHA1P21709 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EPHA1P21709 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
EPHA1P21709 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EPHA1P21709 Y_RNA.136-201ENST00000363444 102 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHA1P21709 EIF4A1P3-201ENST00000411521 244 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHA1P21709 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.37□□□□□ -1.71
EPHA1P21709 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHA1P21709 SNRPEP9-201ENST00000436794 238 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHA1P21709 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.37□□□□□ -1.71
EPHA1P21709 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.37□□□□□ -1.71
EPHA1P21709 RPS5P7-201ENST00000456664 608 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 SNORD2.1-201ENST00000458762 69 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 AC083982.1-201ENST00000485679 344 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 NIP7P2-201ENST00000485801 544 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 HMGB1P22-201ENST00000505315 124 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.37□□□□□ -1.71
EPHA1P21709 SNORA27.4-201ENST00000516650 95 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 RN7SKP147-201ENST00000517154 244 ntBASIC4.37□□□□□ -1.71
EPHA1P21709 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHA1P21709 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms