Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 ATP5C1P1-201ENST00000441945 895 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
CAPN3P20807 S100A11P2-201ENST00000467589 312 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 RPL23AP70-201ENST00000483361 460 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AC023194.1-201ENST00000493084 308 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CAPN3P20807 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.13□□□□□ -1.91
CAPN3P20807 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 EIF4BP1-201ENST00000554881 351 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 MIR5692A1-201ENST00000580523 69 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 OR1M4P-201ENST00000589199 287 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AP000787.2-201ENST00000604432 568 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 AC138932.5-201ENST00000617759 563 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.13□□□□□ -1.91
CAPN3P20807 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AL365361.1-201ENST00000566942 3481 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 AL353743.1-202ENST00000431724 1695 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 CDC27P3-201ENST00000635418 1910 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN3P20807 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN3P20807 DYNLT3P1-201ENST00000378574 347 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 RNU6-748P-201ENST00000384648 107 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CAPN3P20807 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.12□□□□□ -1.91
CAPN3P20807 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.12□□□□□ -1.91
CAPN3P20807 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 KLF3P2-201ENST00000465138 268 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC010493.1-201ENST00000513479 292 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC117532.1-201ENST00000514638 323 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 RN7SKP40-201ENST00000517211 242 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 CYCSP39-201ENST00000565821 309 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC234778.2-201ENST00000566241 354 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN3P20807 AC091152.3-201ENST00000604227 325 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AL670379.4-201ENST00000605279 254 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AL121992.2-201ENST00000606262 256 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC126118.1-201ENST00000607744 628 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AL589743.7-201ENST00000612637 233 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC005332.10-201ENST00000612725 619 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 AC091903.1-201ENST00000624322 454 ntBASIC3.12□□□□□ -1.91
CAPN3P20807 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN3P20807 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN3P20807 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CAPN3P20807 MIR34A-201ENST00000385130 110 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN3P20807 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN3P20807 TOMM20P4-201ENST00000427861 435 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN3P20807 MTATP6P16-201ENST00000434543 526 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN3P20807 USP9YP29-201ENST00000445112 563 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC092001.1-201ENST00000453012 261 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN3P20807 RNU7-182P-201ENST00000459009 62 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 MTCO3P28-201ENST00000513351 515 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN3P20807 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 MTCYBP20-201ENST00000524239 1129 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 OR4R1P-201ENST00000529879 463 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL391840.1-201ENST00000571144 367 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN3P20807 AC010620.1-201ENST00000601088 1102 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL138889.2-201ENST00000603883 242 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC087045.1-201ENST00000605856 382 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AL162274.2-201ENST00000614406 332 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.11□□□□□ -1.91
CAPN3P20807 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.11□□□□□ -1.91
CAPN3P20807 SEPT14P19-203ENST00000633205 211 ntBASIC3.11□□□□□ -1.91
CAPN3P20807 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CAPN3P20807 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN3P20807 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN3P20807 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms