Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPL39P36-201ENST00000490784 156 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 RNU6-143P-201ENST00000516942 93 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.41□□□□□ -2.02
XRCC1P18887 OR4R1P-201ENST00000529879 463 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
XRCC1P18887 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
XRCC1P18887 AL512310.1-201ENST00000548639 172 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 MIR5697-201ENST00000578045 78 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC103710.2-201ENST00000609912 942 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC013562.2-201ENST00000611632 603 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC092140.2-201ENST00000618027 521 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC091304.6-201ENST00000619761 202 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.41□□□□□ -2.02
XRCC1P18887 AP000770.2-201ENST00000623694 100 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC091953.2-201ENST00000623979 160 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 AC068057.2-201ENST00000624047 895 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 ELF2P3-201ENST00000445099 1506 ntBASIC2.41□□□□□ -2.02
XRCC1P18887 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.4□□□□□ -2.02
XRCC1P18887 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
XRCC1P18887 RNU6-960P-201ENST00000364056 120 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNY4P16-201ENST00000364768 94 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNU5E-5P-201ENST00000365379 116 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNU5E-6P-201ENST00000365574 115 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNU6-14P-201ENST00000384630 106 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNU6-750P-201ENST00000390946 107 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 MRPL42P2-201ENST00000403169 426 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 MTCYBP36-201ENST00000404146 440 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RNU4-72P-201ENST00000410754 173 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.4□□□□□ -2.03
XRCC1P18887 RPL36AP53-201ENST00000432891 316 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 HMGB3P12-201ENST00000438745 556 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 MTND1P30-201ENST00000441241 901 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC104389.3-201ENST00000445629 235 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 MTATP6P7-201ENST00000453315 681 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 SNRPFP4-201ENST00000456366 242 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 MTCO2P29-201ENST00000465212 189 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RPS29P20-201ENST00000489592 171 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 RPS27AP10-201ENST00000496103 208 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.4□□□□□ -2.03
XRCC1P18887 RNU6-1092P-201ENST00000516955 87 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
XRCC1P18887 AC106038.2-201ENST00000520706 568 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC022878.1-201ENST00000530684 149 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
XRCC1P18887 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
XRCC1P18887 ARL2BPP2-201ENST00000550907 489 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.4□□□□□ -2.03
XRCC1P18887 AL353778.1-201ENST00000603149 408 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AL358072.1-201ENST00000604156 575 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AP000860.1-201ENST00000605250 559 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC092354.1-201ENST00000606057 376 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AL031775.1-201ENST00000607014 887 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC012360.2-201ENST00000609349 391 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AL355816.2-201ENST00000610049 647 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AL365204.3-201ENST00000612448 685 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC104010.1-201ENST00000616889 150 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AC006338.1-201ENST00000618453 749 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 AL603755.1-201ENST00000619504 163 ntBASIC2.4□□□□□ -2.03
XRCC1P18887 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.4□□□□□ -2.03
XRCC1P18887 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
XRCC1P18887 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
XRCC1P18887 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
XRCC1P18887 SNORA68.1-201ENST00000364537 132 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 XGY1-201ENST00000381172 446 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 RNU6-301P-201ENST00000384277 107 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 AL049545.1-201ENST00000401856 572 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 RNA5SP508-201ENST00000411327 119 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC023141.4-201ENST00000412031 328 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC107081.1-201ENST00000414975 361 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 SKA2P1-201ENST00000425592 390 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
XRCC1P18887 MYL8P-204ENST00000431574 518 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 MTND4P25-201ENST00000441039 533 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
XRCC1P18887 USP9YP12-201ENST00000450481 570 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.39□□□□□ -2.03
XRCC1P18887 RNU6-703P-201ENST00000516946 107 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.39□□□□□ -2.03
XRCC1P18887 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 GLYCAM1-201ENST00000546596 285 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.39□□□□□ -2.03
XRCC1P18887 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
XRCC1P18887 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.39□□□□□ -2.03
XRCC1P18887 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.39□□□□□ -2.03
XRCC1P18887 NIFKP6-201ENST00000598115 845 ntBASIC2.39□□□□□ -2.03
XRCC1P18887 WISP1-OT1-201ENST00000602893 642 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms