Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNORA40.19-201ENST00000390846 128 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 AL596276.1-201ENST00000434465 418 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGA1P17096 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGA1P17096 snoU109.4-201ENST00000458953 143 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 RNU6-498P-201ENST00000459468 107 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGA1P17096 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 SNORA70.16-201ENST00000516390 95 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGA1P17096 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGA1P17096 MIR4422-201ENST00000581938 83 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 AL021997.1-201ENST00000605757 193 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 BX322635.1-201ENST00000605804 496 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 AL590410.1-201ENST00000617925 333 ntBASIC0.62□□□□□ -2.31
HMGA1P17096 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMGA1P17096 DDX43P2-201ENST00000604753 1354 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 RNU6-942P-201ENST00000363002 107 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 OFD1P18Y-201ENST00000420889 959 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC006548.1-201ENST00000427470 102 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AL591043.1-201ENST00000432461 424 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC245047.4-201ENST00000433189 144 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGA1P17096 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGA1P17096 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.61□□□□□ -2.31
HMGA1P17096 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGA1P17096 AC067942.3-201ENST00000512025 362 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC034114.1-201ENST00000520293 285 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGA1P17096 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.61□□□□□ -2.31
HMGA1P17096 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 NIFKP6-201ENST00000598115 845 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AP003973.1-201ENST00000604639 691 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AL355472.4-201ENST00000610233 626 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC010809.3-201ENST00000621310 641 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 CR381572.1-201ENST00000625098 102 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 AC090517.3-201ENST00000625170 141 ntBASIC0.61□□□□□ -2.31
HMGA1P17096 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HMGA1P17096 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 RNU6-1243P-201ENST00000364028 107 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 RNU6-173P-201ENST00000364215 104 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 RNU6-1083P-201ENST00000384022 107 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 RNU6-1197P-201ENST00000391183 107 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGA1P17096 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGA1P17096 MICF-203ENST00000432679 129 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AL135790.2-201ENST00000437701 267 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGA1P17096 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGA1P17096 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGA1P17096 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HMGA1P17096 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGA1P17096 AC135279.1-201ENST00000543493 504 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGA1P17096 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGA1P17096 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGA1P17096 MIR4504-201ENST00000577413 92 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 MIR548Y-201ENST00000582739 110 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AP001269.3-201ENST00000588718 329 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AC087045.1-201ENST00000605856 382 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AP002826.1-201ENST00000608835 315 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AL512506.2-201ENST00000624472 458 ntBASIC0.6□□□□□ -2.31
HMGA1P17096 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.6□□□□□ -2.31
HMGA1P17096 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
HMGA1P17096 RNU6-748P-201ENST00000384648 107 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 RNU1-78P-201ENST00000391248 165 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AL139397.2-201ENST00000404529 772 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGA1P17096 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGA1P17096 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGA1P17096 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGA1P17096 AL354941.1-201ENST00000438600 464 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.59□□□□□ -2.31
HMGA1P17096 MTND4LP16-201ENST00000440828 295 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 NEFMP1-201ENST00000443423 1006 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AL590365.1-201ENST00000450788 243 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
HMGA1P17096 RNU6-420P-201ENST00000458780 107 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AC092989.1-201ENST00000481235 277 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 RPS27AP10-201ENST00000496103 208 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 SCARNA3-201ENST00000517097 143 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AL121821.2-201ENST00000556081 394 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AC087465.1-201ENST00000560574 245 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 AL138478.1-201ENST00000612252 832 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HMGA1P17096 AC012676.2-201ENST00000619258 186 ntBASIC0.59□□□□□ -2.31
HMGA1P17096 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HMGA1P17096 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms