Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CD44P16070 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD44P16070 AC126755.2-208ENST00000327792 462 ntBASIC6.2□□□□□ -1.42
CD44P16070 AC138969.1-213ENST00000331436 462 ntBASIC6.2□□□□□ -1.42
CD44P16070 Y_RNA.344-201ENST00000365381 112 ntBASIC6.2□□□□□ -1.42
CD44P16070 RNU6-487P-201ENST00000365430 104 ntBASIC6.2□□□□□ -1.42
CD44P16070 RNU6-652P-201ENST00000365488 107 ntBASIC6.2□□□□□ -1.42
CD44P16070 AL117342.1-201ENST00000404861 406 ntBASIC6.2□□□□□ -1.42
CD44P16070 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.2□□□□□ -1.42
CD44P16070 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.2□□□□□ -1.42
CD44P16070 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.2□□□□□ -1.42
CD44P16070 RPL23AP14-201ENST00000468281 468 ntBASIC6.2□□□□□ -1.42
CD44P16070 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC6.2□□□□□ -1.42
CD44P16070 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.2□□□□□ -1.42
CD44P16070 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.2□□□□□ -1.42
CD44P16070 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.2□□□□□ -1.42
CD44P16070 MIR4311-201ENST00000580794 100 ntBASIC6.2□□□□□ -1.42
CD44P16070 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.2□□□□□ -1.42
CD44P16070 AL139124.1-201ENST00000609123 421 ntBASIC6.2□□□□□ -1.42
CD44P16070 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.2□□□□□ -1.42
CD44P16070 AC090607.5-201ENST00000615692 224 ntBASIC6.2□□□□□ -1.42
CD44P16070 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
CD44P16070 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CD44P16070 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CD44P16070 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CD44P16070 FAM91A3P-201ENST00000456826 2544 ntBASIC6.2□□□□□ -1.42
CD44P16070 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.2□□□□□ -1.42
CD44P16070 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD44P16070 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD44P16070 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CD44P16070 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CD44P16070 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.19□□□□□ -1.42
CD44P16070 RNU6-1323P-201ENST00000384025 107 ntBASIC6.19□□□□□ -1.42
CD44P16070 MIR518D-201ENST00000385014 87 ntBASIC6.19□□□□□ -1.42
CD44P16070 AC007161.1-204ENST00000423039 460 ntBASIC6.19□□□□□ -1.42
CD44P16070 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.19□□□□□ -1.42
CD44P16070 RPS29P2-201ENST00000479278 136 ntBASIC6.19□□□□□ -1.42
CD44P16070 AC103975.1-201ENST00000482506 483 ntBASIC6.19□□□□□ -1.42
CD44P16070 RPL23AP54-201ENST00000495129 419 ntBASIC6.19□□□□□ -1.42
CD44P16070 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.19□□□□□ -1.42
CD44P16070 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.19□□□□□ -1.42
CD44P16070 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CD44P16070 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD44P16070 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CD44P16070 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
CD44P16070 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD44P16070 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.19□□□□□ -1.42
CD44P16070 AP002512.4-202ENST00000641599 4530 ntBASIC6.18□□□□□ -1.42
CD44P16070 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 AP001029.2-203ENST00000589795 4910 ntBASIC6.18□□□□□ -1.42
CD44P16070 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.18□□□□□ -1.42
CD44P16070 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.18□□□□□ -1.42
CD44P16070 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.18□□□□□ -1.42
CD44P16070 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.18□□□□□ -1.42
CD44P16070 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.18□□□□□ -1.42
CD44P16070 RNU1-72P-201ENST00000362976 153 ntBASIC6.18□□□□□ -1.42
CD44P16070 RNU6-219P-201ENST00000364728 107 ntBASIC6.18□□□□□ -1.42
CD44P16070 Z98749.2-208ENST00000381646 500 ntBASIC6.18□□□□□ -1.42
CD44P16070 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.18□□□□□ -1.42
CD44P16070 AL035660.1-201ENST00000422041 222 ntBASIC6.18□□□□□ -1.42
CD44P16070 RPL23AP1-201ENST00000428990 471 ntBASIC6.18□□□□□ -1.42
CD44P16070 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.18□□□□□ -1.42
CD44P16070 IGHV5-78-201ENST00000450948 295 ntBASIC6.18□□□□□ -1.42
CD44P16070 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.18□□□□□ -1.42
CD44P16070 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC6.18□□□□□ -1.42
CD44P16070 NXT1P1-201ENST00000458481 316 ntBASIC6.18□□□□□ -1.42
CD44P16070 RN7SL583P-201ENST00000475692 287 ntBASIC6.18□□□□□ -1.42
CD44P16070 RN7SL629P-201ENST00000489622 285 ntBASIC6.18□□□□□ -1.42
CD44P16070 AC091912.1-201ENST00000511351 248 ntBASIC6.18□□□□□ -1.42
CD44P16070 AC097462.1-201ENST00000514125 324 ntBASIC6.18□□□□□ -1.42
CD44P16070 SNORD77.4-201ENST00000516158 81 ntBASIC6.18□□□□□ -1.42
CD44P16070 SCARNA15.2-201ENST00000516409 127 ntBASIC6.18□□□□□ -1.42
CD44P16070 AC005972.2-201ENST00000604690 348 ntBASIC6.18□□□□□ -1.42
CD44P16070 SNORD11B-201ENST00000607707 90 ntBASIC6.18□□□□□ -1.42
CD44P16070 AP005431.1-201ENST00000618479 319 ntBASIC6.18□□□□□ -1.42
CD44P16070 AC005261.2-201ENST00000593427 4258 ntBASIC6.18□□□□□ -1.42
CD44P16070 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.18□□□□□ -1.42
CD44P16070 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CD44P16070 AC144833.1-201ENST00000567953 4089 ntBASIC6.18□□□□□ -1.42
CD44P16070 AP005435.3-201ENST00000531260 3198 ntBASIC6.18□□□□□ -1.42
CD44P16070 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CD44P16070 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CD44P16070 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CD44P16070 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CD44P16070 AL591135.1-201ENST00000401578 5914 ntBASIC6.17□□□□□ -1.42
CD44P16070 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CD44P16070 AC125257.1-201ENST00000560400 2930 ntBASIC6.17□□□□□ -1.42
CD44P16070 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD44P16070 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms