Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 ZNF702P-202ENST00000434269 1966 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL1A1P02452 RNU6-252P-201ENST00000363232 107 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 SNORD115-48-201ENST00000364764 76 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 SNORA18.2-201ENST00000383865 132 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 MIR147B-201ENST00000390185 80 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL1A1P02452 AL161449.1-201ENST00000414531 1199 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.32□□□□□ -2.2
COL1A1P02452 AL590233.1-201ENST00000430017 456 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AL512637.2-201ENST00000431287 1256 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.32□□□□□ -2.2
COL1A1P02452 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.32□□□□□ -2.2
COL1A1P02452 AC107032.1-201ENST00000485945 480 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AC138853.1-201ENST00000503549 823 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL1A1P02452 RNU6-405P-201ENST00000516637 110 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 RNU6-467P-201ENST00000517027 110 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.32□□□□□ -2.2
COL1A1P02452 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL1A1P02452 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.32□□□□□ -2.2
COL1A1P02452 AC095057.3-201ENST00000567102 1157 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 HMGN2P15-201ENST00000585707 270 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AL021997.1-201ENST00000605757 193 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AL050343.2-201ENST00000607338 280 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 AC008498.1-201ENST00000613012 531 ntBASIC1.32□□□□□ -2.2
COL1A1P02452 RNA5SP125-201ENST00000364843 120 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 OR51A5P-201ENST00000415429 942 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 NDUFB4P7-201ENST00000423198 363 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC093106.2-201ENST00000428212 385 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC093422.3-201ENST00000428506 305 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AL353689.1-201ENST00000438895 199 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 THAP5P1-201ENST00000439089 262 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 MTCO3P2-201ENST00000457365 171 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 RNU6-1132P-201ENST00000459214 107 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC021382.1-201ENST00000483523 359 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.31□□□□□ -2.2
COL1A1P02452 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL1A1P02452 AC091965.2-201ENST00000512324 613 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 MIR892C-201ENST00000516410 77 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.31□□□□□ -2.2
COL1A1P02452 CR383656.7-201ENST00000548164 174 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 AC012414.2-201ENST00000559474 187 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 SNORD39.3-201ENST00000584451 71 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL1A1P02452 AL031176.1-201ENST00000604554 466 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC106052.1-201ENST00000608029 497 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 FRG1HP-204ENST00000617940 757 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.31□□□□□ -2.2
COL1A1P02452 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
COL1A1P02452 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL1A1P02452 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.31□□□□□ -2.2
COL1A1P02452 RNU6-1083P-201ENST00000384022 107 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 RNU2-47P-201ENST00000410649 186 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 RNU2-15P-201ENST00000410692 191 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 AL590623.1-201ENST00000427864 105 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.31□□□□□ -2.2
COL1A1P02452 AC092757.1-201ENST00000467293 467 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC020699.1-201ENST00000505161 445 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 RNA5SP395-201ENST00000516567 118 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
COL1A1P02452 AP004247.1-201ENST00000531556 1289 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.31□□□□□ -2.2
COL1A1P02452 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.31□□□□□ -2.2
COL1A1P02452 AL391261.3-201ENST00000557194 520 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 SULT1C2P1-202ENST00000562418 459 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 7SK.7-201ENST00000603504 247 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 AC068276.1-201ENST00000605793 379 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 BX322635.1-201ENST00000605804 496 ntBASIC1.31□□□□□ -2.2
COL1A1P02452 GDI2P1-201ENST00000429312 1336 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 Y_RNA.115-201ENST00000363272 98 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
COL1A1P02452 RNU6-750P-201ENST00000390946 107 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AL121978.1-201ENST00000402778 359 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 RNU2-43P-201ENST00000410306 190 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 RNU6-77P-201ENST00000410554 91 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.3□□□□□ -2.2
COL1A1P02452 MTND4P24-201ENST00000424002 397 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.3□□□□□ -2.2
COL1A1P02452 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
COL1A1P02452 AC092170.1-201ENST00000440211 356 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.3□□□□□ -2.2
COL1A1P02452 HAR1A.1-201ENST00000459583 118 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.3□□□□□ -2.2
COL1A1P02452 SNORA31.16-201ENST00000516773 139 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.3□□□□□ -2.2
COL1A1P02452 MIR4299-201ENST00000577899 72 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AP000403.1-201ENST00000603349 851 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms