Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC093788.1-201ENST00000609356 927 ntBASIC3.15□□□□□ -1.91
LDLRP01130 MTND1P37-201ENST00000636562 264 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 AC112487.2-201ENST00000637950 304 ntBASIC3.15□□□□□ -1.91
LDLRP01130 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.15□□□□□ -1.91
LDLRP01130 ZNF807-201ENST00000328088 1707 ntBASIC3.15□□□□□ -1.91
LDLRP01130 AC103988.1-201ENST00000566382 2177 ntBASIC3.15□□□□□ -1.91
LDLRP01130 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LDLRP01130 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.91
LDLRP01130 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDLRP01130 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LDLRP01130 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDLRP01130 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
LDLRP01130 RNU6-282P-201ENST00000365357 103 ntBASIC3.14□□□□□ -1.91
LDLRP01130 RNU6-301P-201ENST00000384277 107 ntBASIC3.14□□□□□ -1.91
LDLRP01130 RNU6-39P-201ENST00000384344 107 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AL359634.1-202ENST00000404721 284 ntBASIC3.14□□□□□ -1.91
LDLRP01130 RNU6-908P-201ENST00000410160 94 ntBASIC3.14□□□□□ -1.91
LDLRP01130 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
LDLRP01130 EEF1A1P40-201ENST00000412883 573 ntBASIC3.14□□□□□ -1.91
LDLRP01130 FCF1P1-201ENST00000432690 571 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AC002486.1-201ENST00000435098 391 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
LDLRP01130 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
LDLRP01130 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.14□□□□□ -1.91
LDLRP01130 AL136380.1-201ENST00000447970 162 ntBASIC3.14□□□□□ -1.91
LDLRP01130 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
LDLRP01130 AC132479.1-201ENST00000449160 144 ntBASIC3.14□□□□□ -1.91
LDLRP01130 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.14□□□□□ -1.91
LDLRP01130 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.14□□□□□ -1.91
LDLRP01130 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.14□□□□□ -1.91
LDLRP01130 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.14□□□□□ -1.91
LDLRP01130 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.14□□□□□ -1.91
LDLRP01130 MIR3921-201ENST00000577308 85 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AC008962.1-201ENST00000605729 304 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AC107294.1-201ENST00000609524 467 ntBASIC3.14□□□□□ -1.91
LDLRP01130 MIR3662-201ENST00000637030 95 ntBASIC3.14□□□□□ -1.91
LDLRP01130 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.14□□□□□ -1.91
LDLRP01130 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDLRP01130 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDLRP01130 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDLRP01130 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDLRP01130 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDLRP01130 RNU4-73P-201ENST00000363164 141 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-511P-201ENST00000363496 107 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-1085P-201ENST00000363576 107 ntBASIC3.13□□□□□ -1.91
LDLRP01130 Y_RNA.159-201ENST00000363674 87 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-1284P-201ENST00000363701 100 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-169P-201ENST00000365336 107 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-701P-201ENST00000384059 107 ntBASIC3.13□□□□□ -1.91
LDLRP01130 Y_RNA.529-201ENST00000384586 119 ntBASIC3.13□□□□□ -1.91
LDLRP01130 MT-TD-201ENST00000387419 68 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
LDLRP01130 MTND3P17-201ENST00000416968 344 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.13□□□□□ -1.91
LDLRP01130 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
LDLRP01130 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC006028.1-201ENST00000438379 402 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 RPS20P20-201ENST00000460498 340 ntBASIC3.13□□□□□ -1.91
LDLRP01130 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
LDLRP01130 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RPL39P36-201ENST00000490784 156 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.13□□□□□ -1.91
LDLRP01130 RNA5SP341-201ENST00000516261 117 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU2-10P-201ENST00000516375 211 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RNU6-1256P-201ENST00000516539 103 ntBASIC3.13□□□□□ -1.91
LDLRP01130 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.13□□□□□ -1.91
LDLRP01130 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 HMGB1P41-201ENST00000520234 440 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC100870.1-201ENST00000522035 505 ntBASIC3.13□□□□□ -1.91
LDLRP01130 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.13□□□□□ -1.91
LDLRP01130 CENPUP1-201ENST00000526649 1202 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
LDLRP01130 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 AL512310.1-201ENST00000548639 172 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.13□□□□□ -1.91
LDLRP01130 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.13□□□□□ -1.91
LDLRP01130 RPS3AP23-202ENST00000574601 686 ntBASIC3.13□□□□□ -1.91
LDLRP01130 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.13□□□□□ -1.91
LDLRP01130 AC006557.5-201ENST00000603126 811 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC025449.1-201ENST00000603896 529 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC009233.1-201ENST00000616477 371 ntBASIC3.13□□□□□ -1.91
LDLRP01130 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
LDLRP01130 AC139792.3-201ENST00000623525 224 ntBASIC3.13□□□□□ -1.91
LDLRP01130 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LDLRP01130 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms