Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.84□□□□□ -2.27
POLR1AO95602 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.84□□□□□ -2.27
POLR1AO95602 AC090666.1-201ENST00000578241 445 ntBASIC0.84□□□□□ -2.27
POLR1AO95602 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
POLR1AO95602 AC016716.1-201ENST00000265882 708 ntBASIC0.84□□□□□ -2.28
POLR1AO95602 AC098934.3-201ENST00000430450 190 ntBASIC0.84□□□□□ -2.28
POLR1AO95602 HSPE1P21-201ENST00000438283 308 ntBASIC0.84□□□□□ -2.28
POLR1AO95602 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.84□□□□□ -2.28
POLR1AO95602 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.84□□□□□ -2.28
POLR1AO95602 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.84□□□□□ -2.28
POLR1AO95602 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.84□□□□□ -2.28
POLR1AO95602 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.84□□□□□ -2.28
POLR1AO95602 CYP2C61P-201ENST00000604072 290 ntBASIC0.84□□□□□ -2.28
POLR1AO95602 RNA5SP276-201ENST00000362580 94 ntBASIC0.83□□□□□ -2.28
POLR1AO95602 RNU6-220P-201ENST00000390919 107 ntBASIC0.83□□□□□ -2.28
POLR1AO95602 AC092047.1-201ENST00000424997 240 ntBASIC0.83□□□□□ -2.28
POLR1AO95602 RPL31P60-201ENST00000478450 367 ntBASIC0.83□□□□□ -2.28
POLR1AO95602 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.83□□□□□ -2.28
POLR1AO95602 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.83□□□□□ -2.28
POLR1AO95602 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.83□□□□□ -2.28
POLR1AO95602 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.83□□□□□ -2.28
POLR1AO95602 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
POLR1AO95602 AL049737.1-201ENST00000413920 1403 ntBASIC0.83□□□□□ -2.28
POLR1AO95602 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
POLR1AO95602 Y_RNA.274-201ENST00000364714 101 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 MIR92A1-201ENST00000385233 78 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 RPS15AP38-201ENST00000413110 372 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 MTCO3P12-201ENST00000416718 547 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 MTCO3P4-201ENST00000419236 787 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.82□□□□□ -2.28
POLR1AO95602 Z82190.1-201ENST00000454534 490 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.82□□□□□ -2.28
POLR1AO95602 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR1AO95602 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.82□□□□□ -2.28
POLR1AO95602 OR5B19P-201ENST00000531766 928 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.82□□□□□ -2.28
POLR1AO95602 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.82□□□□□ -2.28
POLR1AO95602 AL360181.4-201ENST00000621752 134 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 AP006248.3-201ENST00000623580 594 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 AL136313.1-201ENST00000624804 202 ntBASIC0.82□□□□□ -2.28
POLR1AO95602 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR1AO95602 ZNF29P-201ENST00000225587 168 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
POLR1AO95602 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.81□□□□□ -2.28
POLR1AO95602 AL359385.1-201ENST00000456509 365 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 CYP4A27P-201ENST00000567218 190 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR1AO95602 AC004852.3-201ENST00000614131 326 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AC090132.2-201ENST00000615881 347 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AC027309.3-201ENST00000623419 351 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AL513185.3-201ENST00000433335 1300 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
POLR1AO95602 Y_RNA.280-201ENST00000364765 112 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 RNU4-78P-201ENST00000410940 126 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 EDDM3CP-201ENST00000415977 425 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AC092393.1-201ENST00000439625 742 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR1AO95602 HMGN2P9-201ENST00000476875 229 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 FAM206BP-201ENST00000510179 541 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 SNORA62.5-201ENST00000516634 120 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR1AO95602 AL355802.3-201ENST00000607571 545 ntBASIC0.81□□□□□ -2.28
POLR1AO95602 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR1AO95602 SNORA25.8-201ENST00000364831 128 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 RNU6-35P-201ENST00000384530 107 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 SSXP10-201ENST00000402595 565 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 AL158823.1-201ENST00000418441 478 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.8□□□□□ -2.28
POLR1AO95602 AL034418.1-201ENST00000448675 860 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR1AO95602 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 MIR3198-2-201ENST00000577868 80 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 AC093838.1-201ENST00000613014 469 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 AC123912.3-201ENST00000600907 1367 ntBASIC0.8□□□□□ -2.28
POLR1AO95602 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
POLR1AO95602 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
POLR1AO95602 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
POLR1AO95602 RNU5D-1-201ENST00000363299 116 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 RNU6-263P-201ENST00000363811 107 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 MIR493-201ENST00000385254 89 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 MICF-203ENST00000432679 129 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.79□□□□□ -2.28
POLR1AO95602 CBX3P3-201ENST00000508108 532 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.79□□□□□ -2.28
POLR1AO95602 MIR3609-201ENST00000582661 80 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.79□□□□□ -2.28
POLR1AO95602 HSPE1P19-201ENST00000603327 295 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 AL121890.5-201ENST00000620848 304 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 AC024595.1-201ENST00000623088 387 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 Z69720.2-201ENST00000624755 279 ntBASIC0.79□□□□□ -2.28
POLR1AO95602 Y_RNA.412-201ENST00000384001 104 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 RNU6-1328P-201ENST00000410938 106 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.78□□□□□ -2.28
POLR1AO95602 AC241584.1-201ENST00000438469 1241 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 SCARNA3-201ENST00000517097 143 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.78□□□□□ -2.28
POLR1AO95602 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.78□□□□□ -2.28
POLR1AO95602 MIR4713-201ENST00000582691 75 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 AC010620.1-201ENST00000601088 1102 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms