Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.93□□□□□ -1.78
CDKL5O76039 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDKL5O76039 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.93□□□□□ -1.78
CDKL5O76039 AC121333.1-201ENST00000567488 2709 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDKL5O76039 AC007496.3-201ENST00000624987 3443 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.92□□□□□ -1.78
CDKL5O76039 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDKL5O76039 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDKL5O76039 RNU1-75P-201ENST00000347264 129 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDKL5O76039 RNA5SP197-201ENST00000363357 119 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 Y_RNA.128-201ENST00000363391 112 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RNU6-1284P-201ENST00000363701 100 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 SMIM11P1-201ENST00000369586 178 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RNU6-1013P-201ENST00000384180 107 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 MIR200C-201ENST00000384980 68 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RNU6-550P-201ENST00000391057 101 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RNY4P36-201ENST00000391116 96 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 MIR548K-201ENST00000408406 116 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 BEND7P1-201ENST00000422058 457 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 GPM6BP2-201ENST00000432046 144 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 GPM6BP1-201ENST00000446387 144 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RPS27AP1-201ENST00000475545 471 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 RPL7P43-201ENST00000478876 753 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 APOOP4-201ENST00000513530 597 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 IGKV2-26-201ENST00000518305 343 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 NDUFB9P3-201ENST00000521269 501 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AP003385.6-201ENST00000531603 374 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.92□□□□□ -1.78
CDKL5O76039 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.92□□□□□ -1.78
CDKL5O76039 AP000763.2-201ENST00000540641 163 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.92□□□□□ -1.78
CDKL5O76039 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.92□□□□□ -1.78
CDKL5O76039 AC034105.4-201ENST00000568304 277 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 SNRPGP17-201ENST00000603780 214 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AL670379.11-201ENST00000604059 253 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AL670379.10-201ENST00000604330 253 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AL670379.12-201ENST00000605291 253 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC080078.3-201ENST00000605407 463 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AL670379.9-201ENST00000605428 253 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC124303.1-201ENST00000605703 360 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 SNORA51-201ENST00000606420 132 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.92□□□□□ -1.78
CDKL5O76039 Z82243.1-201ENST00000609432 473 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 DUSP12P1-201ENST00000612874 516 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 SNORD39.4-201ENST00000620099 78 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 AC048347.1-201ENST00000624621 427 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDKL5O76039 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDKL5O76039 TPTE2P4-201ENST00000258589 1605 ntBASIC3.92□□□□□ -1.78
CDKL5O76039 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDKL5O76039 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDKL5O76039 SNORA63C-201ENST00000364578 129 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 MIR559-201ENST00000385188 96 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 MIR591-201ENST00000385290 95 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RNU4-65P-201ENST00000410473 140 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RNU4-46P-201ENST00000410818 138 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RNU4-78P-201ENST00000410940 126 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC093578.1-201ENST00000415219 368 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
CDKL5O76039 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.91□□□□□ -1.78
CDKL5O76039 AC091286.1-201ENST00000431233 461 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.91□□□□□ -1.78
CDKL5O76039 AL162389.1-201ENST00000449233 177 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC234775.1-201ENST00000454247 670 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC008481.1-201ENST00000463278 396 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RPL21P93-201ENST00000480465 489 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.91□□□□□ -1.78
CDKL5O76039 HMGB3P15-201ENST00000507326 574 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RBBP4P6-201ENST00000508098 202 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.91□□□□□ -1.78
CDKL5O76039 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.91□□□□□ -1.78
CDKL5O76039 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.91□□□□□ -1.78
CDKL5O76039 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC100870.1-201ENST00000522035 505 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
CDKL5O76039 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CDKL5O76039 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.91□□□□□ -1.78
CDKL5O76039 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDKL5O76039 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.91□□□□□ -1.78
CDKL5O76039 AC092747.3-201ENST00000603769 301 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 AP000942.4-201ENST00000604811 241 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 TUG1_2.1-201ENST00000614234 87 ntBASIC3.91□□□□□ -1.78
CDKL5O76039 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.91□□□□□ -1.78
CDKL5O76039 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.91□□□□□ -1.78
CDKL5O76039 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.9□□□□□ -1.78
CDKL5O76039 ZNF33CP-201ENST00000432492 2030 ntBASIC3.9□□□□□ -1.78
CDKL5O76039 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDKL5O76039 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDKL5O76039 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CDKL5O76039 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDKL5O76039 MIR135A2-201ENST00000384854 100 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 RPL5P18-201ENST00000406671 891 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 POLHP1-201ENST00000411806 470 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.9□□□□□ -1.79
CDKL5O76039 RPL31P12-201ENST00000422587 358 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 RAC1P6-201ENST00000423911 575 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 Z82205.1-201ENST00000428456 297 ntBASIC3.9□□□□□ -1.79
CDKL5O76039 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms