Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR4287-201ENST00000579398 78 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC245884.12-201ENST00000615364 59 ntBASIC0.2□□□□□ -2.38
USH2AO75445 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
USH2AO75445 PTP4A1P1-201ENST00000420539 515 ntBASIC0.2□□□□□ -2.38
USH2AO75445 UBE2V2P3-201ENST00000433562 437 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC021146.2-201ENST00000504736 556 ntBASIC0.2□□□□□ -2.38
USH2AO75445 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.2□□□□□ -2.38
USH2AO75445 AC006518.2-201ENST00000542513 940 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AL109918.3-201ENST00000603072 338 ntBASIC0.2□□□□□ -2.38
USH2AO75445 MIR4320-201ENST00000636981 65 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.2□□□□□ -2.38
USH2AO75445 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.2□□□□□ -2.38
USH2AO75445 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.2□□□□□ -2.38
USH2AO75445 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.2□□□□□ -2.38
USH2AO75445 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.2□□□□□ -2.38
USH2AO75445 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.2□□□□□ -2.38
USH2AO75445 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.2□□□□□ -2.38
USH2AO75445 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.2□□□□□ -2.38
USH2AO75445 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
USH2AO75445 CFTRP2-201ENST00000634304 199 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.2□□□□□ -2.38
USH2AO75445 RN7SKP61-201ENST00000410642 295 ntBASIC0.2□□□□□ -2.38
USH2AO75445 UBE2FP1-201ENST00000416536 447 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.2□□□□□ -2.38
USH2AO75445 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.2□□□□□ -2.38
USH2AO75445 AL355812.1-201ENST00000603215 216 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC091304.9-201ENST00000612091 226 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AL591926.4-201ENST00000616895 298 ntBASIC0.2□□□□□ -2.38
USH2AO75445 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.2□□□□□ -2.38
USH2AO75445 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.2□□□□□ -2.38
USH2AO75445 RNU6-119P-201ENST00000364882 107 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC016717.1-201ENST00000448918 286 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.2□□□□□ -2.38
USH2AO75445 XKRY2-202ENST00000623874 1581 ntBASIC0.19□□□□□ -2.38
USH2AO75445 XKRY-202ENST00000624960 1581 ntBASIC0.19□□□□□ -2.38
USH2AO75445 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
USH2AO75445 MIR587-201ENST00000384845 96 ntBASIC0.19□□□□□ -2.38
USH2AO75445 MTND5P14-201ENST00000441481 1267 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.19□□□□□ -2.38
USH2AO75445 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.19□□□□□ -2.38
USH2AO75445 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.19□□□□□ -2.38
USH2AO75445 SNORA62.5-201ENST00000516634 120 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC090115.3-201ENST00000553218 849 ntBASIC0.19□□□□□ -2.38
USH2AO75445 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC106900.2-201ENST00000604994 317 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC011155.2-201ENST00000623202 216 ntBASIC0.19□□□□□ -2.38
USH2AO75445 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-1072P-201ENST00000384703 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-443P-201ENST00000384780 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 EIF1P1-201ENST00000421436 341 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC073464.3-201ENST00000422564 712 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.19□□□□□ -2.38
USH2AO75445 AL590365.1-201ENST00000450788 243 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.19□□□□□ -2.38
USH2AO75445 AC098583.1-201ENST00000480875 255 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RPL30P5-201ENST00000494923 336 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC012676.2-201ENST00000619258 186 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-302P-201ENST00000365249 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 PAXBP1P1-201ENST00000449315 447 ntBASIC0.19□□□□□ -2.38
USH2AO75445 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
USH2AO75445 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.19□□□□□ -2.38
USH2AO75445 FAM206BP-201ENST00000510179 541 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC048346.1-201ENST00000510247 144 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AL133507.1-201ENST00000605269 557 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AL021879.1-201ENST00000611756 288 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AL121890.5-201ENST00000620848 304 ntBASIC0.19□□□□□ -2.38
USH2AO75445 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.19□□□□□ -2.38
USH2AO75445 ZNF29P-201ENST00000225587 168 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-1320P-201ENST00000390838 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-1269P-201ENST00000391139 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC241520.1-201ENST00000422654 1099 ntBASIC0.19□□□□□ -2.38
USH2AO75445 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-599P-201ENST00000459383 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-1193P-201ENST00000459461 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 CBX3P3-201ENST00000508108 532 ntBASIC0.19□□□□□ -2.38
USH2AO75445 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
USH2AO75445 MIR4512-201ENST00000583257 77 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC008945.2-201ENST00000606056 604 ntBASIC0.19□□□□□ -2.38
USH2AO75445 AC104763.3-201ENST00000613765 618 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-368P-201ENST00000620928 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 RNU6-538P-201ENST00000622329 107 ntBASIC0.19□□□□□ -2.38
USH2AO75445 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
USH2AO75445 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
USH2AO75445 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
USH2AO75445 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.18□□□□□ -2.38
USH2AO75445 HMGB3P10-201ENST00000434734 572 ntBASIC0.18□□□□□ -2.38
USH2AO75445 PRPS1P1-201ENST00000445305 876 ntBASIC0.18□□□□□ -2.38
USH2AO75445 SNORD124-201ENST00000459577 104 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AC098862.1-201ENST00000504991 413 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.18□□□□□ -2.38
USH2AO75445 RNU6-138P-201ENST00000515952 107 ntBASIC0.18□□□□□ -2.38
USH2AO75445 EIF4EP5-201ENST00000528228 640 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
USH2AO75445 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.18□□□□□ -2.38
USH2AO75445 AC090666.1-201ENST00000578241 445 ntBASIC0.18□□□□□ -2.38
USH2AO75445 FAM60CP-201ENST00000591086 664 ntBASIC0.18□□□□□ -2.38
USH2AO75445 AC107214.2-201ENST00000608204 634 ntBASIC0.18□□□□□ -2.38
USH2AO75445 DUSP12P1-201ENST00000612874 516 ntBASIC0.18□□□□□ -2.38
USH2AO75445 uc_338.9-201ENST00000617424 182 ntBASIC0.18□□□□□ -2.38
USH2AO75445 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms