Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNA5SP471-201ENST00000516971 106 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4BO75351 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4BO75351 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4BO75351 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS4BO75351 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4BO75351 AC023043.2-201ENST00000589678 1026 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AC098826.3-201ENST00000603823 466 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AL161798.1-201ENST00000604630 131 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AP002826.1-201ENST00000608835 315 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AC107294.1-201ENST00000609524 467 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 DUSP12P1-201ENST00000612874 516 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 FAM157A-202ENST00000615155 405 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AC090574.1-201ENST00000623186 233 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 MTND1P37-201ENST00000636562 264 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 MTCO1P12-201ENST00000414273 1543 ntBASIC3.69□□□□□ -1.82
VPS4BO75351 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
VPS4BO75351 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS4BO75351 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS4BO75351 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS4BO75351 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS4BO75351 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS4BO75351 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS4BO75351 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 Y_RNA.58-201ENST00000362807 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNU6-1167P-201ENST00000363227 94 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 Y_RNA.154-201ENST00000363624 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNY3P1-201ENST00000365085 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNY3-201ENST00000365484 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 Y_RNA.387-201ENST00000383918 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 Y_RNA.490-201ENST00000384413 102 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNU6-45P-201ENST00000384471 107 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNU6-328P-201ENST00000390887 106 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 PTMAP5-201ENST00000393073 333 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL139039.1-201ENST00000401900 692 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL391417.1-201ENST00000404100 426 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 VN1R36P-201ENST00000414936 291 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 AL356867.1-201ENST00000429623 299 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS4BO75351 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS4BO75351 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 AC074250.1-201ENST00000511117 192 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 RNU6-256P-201ENST00000516747 97 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 IGKV2D-19-201ENST00000523346 262 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 OR5D17P-201ENST00000531492 978 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4BO75351 MIR4298-201ENST00000584380 73 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL670379.10-201ENST00000604330 253 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL670379.9-201ENST00000605428 253 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AC005344.1-201ENST00000613391 459 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AC007742.2-201ENST00000618226 398 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 AL160413.1-201ENST00000622780 310 ntBASIC3.68□□□□□ -1.82
VPS4BO75351 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4BO75351 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4BO75351 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4BO75351 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4BO75351 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4BO75351 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS4BO75351 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS4BO75351 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS4BO75351 SNORA4.3-201ENST00000365564 137 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS4BO75351 FAT1P1-201ENST00000406588 507 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS4BO75351 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RPL23AP69-201ENST00000431134 458 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 AC073063.1-201ENST00000434352 607 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RPS3AP52-201ENST00000435639 297 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AL360271.2-201ENST00000447710 161 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS4BO75351 RNU7-170P-201ENST00000459303 61 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RPL7P5-201ENST00000471472 736 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RPL31P60-201ENST00000478450 367 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 RNU6-566P-201ENST00000516790 107 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 SNORA25.17-201ENST00000517184 124 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 ATP5F1P5-201ENST00000526403 760 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 CYCSP27-201ENST00000527643 293 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AP000763.2-201ENST00000540641 163 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS4BO75351 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS4BO75351 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS4BO75351 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS4BO75351 MIR5195-201ENST00000583555 115 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 MIR5692C1-201ENST00000585309 91 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 AC002545.1-201ENST00000592511 181 ntBASIC3.67□□□□□ -1.82
VPS4BO75351 KLKP1-201ENST00000595979 403 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms