Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU6-387P-201ENST00000411331 105 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 USP9YP20-201ENST00000419224 558 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT3O75175 GAPDHP27-201ENST00000447427 1020 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 HMGN1P10-201ENST00000474557 553 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
CNOT3O75175 AP001804.3-201ENST00000525146 880 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT3O75175 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.42□□□□□ -1.86
CNOT3O75175 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT3O75175 FRG2DP-202ENST00000566967 323 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 MIR3942-201ENST00000585264 109 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 SRGNP1-201ENST00000603392 451 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT3O75175 DUSP12P1-201ENST00000612874 516 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 AP001486.3-201ENST00000615334 372 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 MTCO1P12-201ENST00000414273 1543 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT3O75175 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT3O75175 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.42□□□□□ -1.86
CNOT3O75175 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT3O75175 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT3O75175 MTND5P3-201ENST00000438536 1800 ntBASIC3.42□□□□□ -1.86
CNOT3O75175 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNOT3O75175 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
CNOT3O75175 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNOT3O75175 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC110754.1-201ENST00000399740 601 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 MIR548F5-201ENST00000408421 86 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.41□□□□□ -1.86
CNOT3O75175 AL353729.1-201ENST00000425044 720 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 CALM2P2-201ENST00000428512 440 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AL158071.1-201ENST00000430315 461 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC073063.1-201ENST00000434352 607 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC005019.1-201ENST00000436455 431 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.41□□□□□ -1.86
CNOT3O75175 BRK1P2-201ENST00000442875 223 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC020550.1-201ENST00000447385 163 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 PRSS3P4-201ENST00000453323 162 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT3O75175 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT3O75175 SNORD105B-201ENST00000458770 79 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 SCARNA18-201ENST00000459004 134 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 SNORD19B-201ENST00000459623 84 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT3O75175 RNU6-864P-201ENST00000516256 108 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT3O75175 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.41□□□□□ -1.86
CNOT3O75175 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.41□□□□□ -1.86
CNOT3O75175 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.41□□□□□ -1.86
CNOT3O75175 AC008521.1-201ENST00000587471 187 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 BNIP3P25-201ENST00000596023 559 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC007179.3-201ENST00000604976 235 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 HMGN2P28-201ENST00000606102 262 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC012409.4-201ENST00000612923 249 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC084757.4-201ENST00000616350 526 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 MIR7975-201ENST00000619350 68 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 AC090971.5-201ENST00000621102 293 ntBASIC3.41□□□□□ -1.86
CNOT3O75175 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT3O75175 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
CNOT3O75175 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CNOT3O75175 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.41□□□□□ -1.86
CNOT3O75175 AC090337.1-201ENST00000579651 2074 ntBASIC3.4□□□□□ -1.86
CNOT3O75175 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.4□□□□□ -1.86
CNOT3O75175 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CNOT3O75175 SNORD113-7-201ENST00000363762 77 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNU6-190P-201ENST00000384154 102 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNU6-1297P-201ENST00000384415 104 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNU6-692P-201ENST00000384496 107 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNA5SP219-201ENST00000390940 113 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 POLHP1-201ENST00000411806 470 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 MTCO2P27-201ENST00000420740 428 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AL365440.1-201ENST00000436135 2167 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 NEFMP1-201ENST00000443423 1006 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AC107399.1-201ENST00000451226 265 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 Y_RNA.635-201ENST00000459041 101 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 TRBV1-201ENST00000476502 284 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 MTCO1P29-201ENST00000496868 288 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNOT3O75175 TBCAP3-201ENST00000512475 312 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RPL39P5-202ENST00000512505 151 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 RNU4-60P-201ENST00000517239 135 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.4□□□□□ -1.87
CNOT3O75175 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.4□□□□□ -1.87
CNOT3O75175 MTCO3P13-201ENST00000577757 781 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 XIAPP1-201ENST00000603162 600 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AL138889.2-201ENST00000603883 242 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 APOOP1-201ENST00000604695 592 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 Z82243.1-201ENST00000609432 473 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 AL365204.3-201ENST00000612448 685 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CNOT3O75175 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
CNOT3O75175 MTND4LP32-201ENST00000636111 270 ntBASIC3.4□□□□□ -1.87
CNOT3O75175 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.4□□□□□ -1.87
CNOT3O75175 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CNOT3O75175 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms