Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.11□□□□□ -1.59
GFRA3O60609 SNX18P3-202ENST00000565670 1750 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.11□□□□□ -1.59
GFRA3O60609 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA3O60609 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA3O60609 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 AC092268.1-201ENST00000342691 405 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 RNY1P1-201ENST00000364372 112 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 RNU1-59P-201ENST00000364829 162 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 SNORA29-201ENST00000384183 140 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 RNU6-136P-201ENST00000384663 107 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 MIR129-1-201ENST00000384972 72 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 MIR301A-201ENST00000385261 86 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 U3.40-201ENST00000408706 208 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 SNORA19.1-201ENST00000410656 129 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC099670.2-201ENST00000435130 321 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA3O60609 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.1□□□□□ -1.59
GFRA3O60609 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA3O60609 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA3O60609 RPL21P10-201ENST00000463521 490 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.1□□□□□ -1.59
GFRA3O60609 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 AC023632.4-201ENST00000517783 191 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.1□□□□□ -1.59
GFRA3O60609 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA3O60609 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.1□□□□□ -1.59
GFRA3O60609 MIR4444-1-201ENST00000581696 74 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 MIR4444-2-201ENST00000584390 74 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC006130.2-201ENST00000586202 326 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC005191.1-201ENST00000603950 358 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 U1.25-201ENST00000614085 162 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AL450472.3-201ENST00000615578 367 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 U1.34-201ENST00000618578 162 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC024581.2-201ENST00000619986 252 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 AC109446.4-201ENST00000623235 2755 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
GFRA3O60609 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 AL360270.2-201ENST00000562952 5985 ntBASIC5.1□□□□□ -1.59
GFRA3O60609 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA3O60609 AC093535.2-201ENST00000624769 2326 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
GFRA3O60609 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA3O60609 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA3O60609 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA3O60609 AC007159.1-201ENST00000566529 4706 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA3O60609 UBE2L2-201ENST00000254302 429 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA3O60609 RNU6-242P-201ENST00000384359 107 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 YPEL5P1-201ENST00000419731 367 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 AC090774.1-201ENST00000435925 246 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 RNU6-893P-201ENST00000458841 100 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 RPL30P12-201ENST00000474666 353 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 AP001880.2-201ENST00000538233 448 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.09□□□□□ -1.59
GFRA3O60609 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA3O60609 AL035470.1-201ENST00000622571 220 ntBASIC5.09□□□□□ -1.59
GFRA3O60609 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA3O60609 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
GFRA3O60609 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.09□□□□□ -1.6
GFRA3O60609 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
GFRA3O60609 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
GFRA3O60609 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA3O60609 AP000547.3-204ENST00000588548 2523 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.08□□□□□ -1.6
GFRA3O60609 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA3O60609 AC005725.1-201ENST00000577346 2607 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GFRA3O60609 RNU1-94P-201ENST00000362627 173 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 Y_RNA.73-201ENST00000362910 113 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 RNA5SP391-201ENST00000363456 119 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 SNORD115-8-201ENST00000363856 82 ntBASIC5.08□□□□□ -1.6
GFRA3O60609 RNVU1-3-201ENST00000364313 161 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms