Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HMGN1P14-201ENST00000412459 517 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 ZNF90P2-204ENST00000419323 1075 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 NUP35P1-201ENST00000422734 947 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 AL031667.1-201ENST00000440222 725 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 SNORA59A-201ENST00000459326 152 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AC091965.2-201ENST00000512324 613 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 TBCAP3-201ENST00000512475 312 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.48□□□□□ -2.01
LCMT2O60294 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 Y_RNA.672-201ENST00000516289 104 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.48□□□□□ -2.01
LCMT2O60294 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.48□□□□□ -2.01
LCMT2O60294 AC010620.1-201ENST00000601088 1102 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AL356575.1-201ENST00000603008 283 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AC098826.3-201ENST00000603823 466 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AL161798.1-201ENST00000604630 131 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AL451064.1-201ENST00000607718 471 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 AC013562.2-201ENST00000611632 603 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.48□□□□□ -2.01
LCMT2O60294 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LCMT2O60294 AC135776.4-201ENST00000624300 1904 ntBASIC2.48□□□□□ -2.01
LCMT2O60294 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LCMT2O60294 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LCMT2O60294 ELL2P3-201ENST00000457883 1602 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RNU6-188P-201ENST00000364207 107 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RNU6-512P-201ENST00000364438 103 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RN7SKP226-201ENST00000364912 300 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 SMIM11P1-201ENST00000369586 178 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 SNORA40.3-201ENST00000390964 122 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 RN7SKP142-201ENST00000411236 328 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RNU6-195P-201ENST00000411352 109 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 SEPT2P1-201ENST00000419651 180 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
LCMT2O60294 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.47□□□□□ -2.01
LCMT2O60294 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 SNRPEP9-201ENST00000436794 238 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 CECR9-201ENST00000453421 199 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AC013267.1-201ENST00000458227 267 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RNA5SP269-201ENST00000459032 137 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AC107626.1-201ENST00000471084 183 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 SNORA31.18-201ENST00000517043 134 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 RNU6-1220P-201ENST00000517126 108 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AC243972.3-201ENST00000539655 198 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 AP005136.1-201ENST00000579765 429 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 AL358072.1-201ENST00000604156 575 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LCMT2O60294 AC008250.2-201ENST00000615261 205 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AL589994.2-201ENST00000621124 579 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 Z69908.1-201ENST00000622603 247 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.47□□□□□ -2.01
LCMT2O60294 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
LCMT2O60294 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LCMT2O60294 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LCMT2O60294 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCMT2O60294 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCMT2O60294 UBE2L2-201ENST00000254302 429 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 SNORD62.1-201ENST00000362541 86 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 Y_RNA.245-201ENST00000364493 95 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 RNY4P34-201ENST00000364779 95 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 RNU6-39P-201ENST00000384344 107 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 MIR196B-201ENST00000384852 84 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 MRPL42P2-201ENST00000403169 426 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.46□□□□□ -2.02
LCMT2O60294 RAC1P6-201ENST00000423911 575 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 ELOCP14-201ENST00000428070 331 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
LCMT2O60294 AC119618.1-201ENST00000434191 222 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AC104850.1-201ENST00000435940 476 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.46□□□□□ -2.02
LCMT2O60294 ELOCP7-201ENST00000439968 331 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 NEFMP1-201ENST00000443423 1006 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 ST13P20-201ENST00000447996 1065 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.46□□□□□ -2.02
LCMT2O60294 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.46□□□□□ -2.02
LCMT2O60294 AC117532.1-201ENST00000514638 323 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AL356057.1-201ENST00000533798 831 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 RPS3AP4-201ENST00000555161 764 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.46□□□□□ -2.02
LCMT2O60294 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.46□□□□□ -2.02
LCMT2O60294 AC004805.2-201ENST00000605382 482 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AL158063.1-201ENST00000615349 536 ntBASIC2.46□□□□□ -2.02
LCMT2O60294 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms