Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ACTN4O43707 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ACTN4O43707 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ACTN4O43707 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.55□□□□□ -1.52
ACTN4O43707 RNU6-78P-201ENST00000362897 107 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 RNU6-1145P-201ENST00000384246 107 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 SNORA66-201ENST00000384792 133 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 MIR329-1-201ENST00000385028 80 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.55□□□□□ -1.52
ACTN4O43707 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.55□□□□□ -1.52
ACTN4O43707 U3.36-201ENST00000408418 213 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 EIF1AXP1-201ENST00000419267 435 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 AC079355.1-201ENST00000421770 223 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 CKS1BP6-201ENST00000424932 240 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 AC074290.1-201ENST00000448883 135 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.55□□□□□ -1.52
ACTN4O43707 RN7SL172P-201ENST00000460535 303 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 AF186996.7-201ENST00000492781 209 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 COX6B1P5-201ENST00000509843 249 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 RNA5SP249-201ENST00000516127 99 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 SNORA31.19-201ENST00000517079 126 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 DEFB131C-201ENST00000528817 165 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.55□□□□□ -1.52
ACTN4O43707 RN7SL435P-201ENST00000584418 282 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.55□□□□□ -1.52
ACTN4O43707 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
ACTN4O43707 AC022441.3-201ENST00000605737 136 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 AC110491.1-201ENST00000562191 2010 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ACTN4O43707 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
ACTN4O43707 SAMMSON-226ENST00000642089 1582 ntBASIC5.55□□□□□ -1.52
ACTN4O43707 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.54□□□□□ -1.52
ACTN4O43707 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
ACTN4O43707 HLFP1-201ENST00000402375 499 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AL357515.1-201ENST00000402967 542 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 ELOCP19-201ENST00000411919 318 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.54□□□□□ -1.52
ACTN4O43707 EBAG9P1-201ENST00000418955 543 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 RPS15AP5-201ENST00000436276 388 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.54□□□□□ -1.52
ACTN4O43707 AL359073.1-201ENST00000448036 403 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC000111.2-201ENST00000448200 210 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 RPS20P10-201ENST00000451209 253 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.54□□□□□ -1.52
ACTN4O43707 RN7SKP260-201ENST00000516907 149 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 RNA5SP165-201ENST00000517142 115 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC022790.1-201ENST00000522872 204 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC021006.3-201ENST00000530771 192 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 MIR4679-2-201ENST00000578358 77 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 MIR4489-201ENST00000578869 62 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 MIR4472-2-201ENST00000582069 67 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC090616.3-201ENST00000582184 217 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 MIR4691-201ENST00000583764 85 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC005520.5-201ENST00000613926 164 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.54□□□□□ -1.52
ACTN4O43707 AL672167.1-205ENST00000641112 3080 ntBASIC5.54□□□□□ -1.52
ACTN4O43707 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ACTN4O43707 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
ACTN4O43707 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ACTN4O43707 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ACTN4O43707 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ACTN4O43707 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ACTN4O43707 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.54□□□□□ -1.52
ACTN4O43707 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ACTN4O43707 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 AC116096.1-201ENST00000566804 2314 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.53□□□□□ -1.52
ACTN4O43707 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 SAGE2P-201ENST00000420011 2126 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ACTN4O43707 RNU6-1272P-201ENST00000362776 107 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 SNORA72.2-201ENST00000365028 127 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 Y_RNA.319-201ENST00000365138 92 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 RNU6-166P-201ENST00000384371 107 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 RNU6-837P-201ENST00000391056 108 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 SNORA40C-201ENST00000391285 128 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.53□□□□□ -1.52
ACTN4O43707 snoU109.2-201ENST00000459316 135 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 RN7SKP234-201ENST00000517173 224 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.53□□□□□ -1.52
ACTN4O43707 UBL5P4-201ENST00000562584 236 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.53□□□□□ -1.52
ACTN4O43707 DNAJC19P2-201ENST00000593340 302 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 TUG1_4.1-201ENST00000619464 181 ntBASIC5.53□□□□□ -1.52
ACTN4O43707 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ACTN4O43707 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ACTN4O43707 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ACTN4O43707 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ACTN4O43707 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms