Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RNF13O43567 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF13O43567 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF13O43567 AC012213.3-201ENST00000577199 777 ntBASIC2.05□□□□□ -2.08
RNF13O43567 MIR4782-201ENST00000577987 79 ntBASIC2.05□□□□□ -2.08
RNF13O43567 MIR3162-201ENST00000581818 82 ntBASIC2.05□□□□□ -2.08
RNF13O43567 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
RNF13O43567 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF13O43567 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF13O43567 BNIP3P9-201ENST00000603714 553 ntBASIC2.05□□□□□ -2.08
RNF13O43567 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.05□□□□□ -2.08
RNF13O43567 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.05□□□□□ -2.08
RNF13O43567 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF13O43567 AC009159.1-201ENST00000618386 642 ntBASIC2.05□□□□□ -2.08
RNF13O43567 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
RNF13O43567 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF13O43567 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RNF13O43567 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF13O43567 RNU1-72P-201ENST00000362976 153 ntBASIC2.04□□□□□ -2.08
RNF13O43567 RNU6-1280P-201ENST00000365211 107 ntBASIC2.04□□□□□ -2.08
RNF13O43567 RNA5SP240-201ENST00000365355 128 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
RNF13O43567 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.04□□□□□ -2.08
RNF13O43567 TIMM9P1-201ENST00000436122 256 ntBASIC2.04□□□□□ -2.08
RNF13O43567 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.04□□□□□ -2.08
RNF13O43567 GPM6BP3-201ENST00000442797 145 ntBASIC2.04□□□□□ -2.08
RNF13O43567 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.04□□□□□ -2.08
RNF13O43567 RPL23AP35-201ENST00000451906 501 ntBASIC2.04□□□□□ -2.08
RNF13O43567 CYP2C59P-201ENST00000457790 269 ntBASIC2.04□□□□□ -2.08
RNF13O43567 RNU6-953P-201ENST00000459154 107 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.04□□□□□ -2.08
RNF13O43567 RPS27P21-201ENST00000486977 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RNF13O43567 GTF2IP9-201ENST00000502460 301 ntBASIC2.04□□□□□ -2.08
RNF13O43567 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RNF13O43567 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.04□□□□□ -2.08
RNF13O43567 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AC009902.1-201ENST00000519351 183 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.04□□□□□ -2.08
RNF13O43567 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.04□□□□□ -2.08
RNF13O43567 AC009097.3-201ENST00000563557 1018 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AC078899.2-201ENST00000595282 212 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.6-201ENST00000603753 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.11-201ENST00000604059 253 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AC008162.1-201ENST00000604718 254 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.1-201ENST00000604752 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.5-201ENST00000605253 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.12-201ENST00000605291 253 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL158042.1-201ENST00000605338 460 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.8-201ENST00000605353 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 AL670379.7-201ENST00000605823 252 ntBASIC2.04□□□□□ -2.08
RNF13O43567 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RNF13O43567 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
RNF13O43567 RNY4P24-201ENST00000362735 96 ntBASIC2.03□□□□□ -2.08
RNF13O43567 RNU1-91P-201ENST00000364746 163 ntBASIC2.03□□□□□ -2.08
RNF13O43567 RNU6-636P-201ENST00000384598 107 ntBASIC2.03□□□□□ -2.08
RNF13O43567 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
RNF13O43567 MIR122-201ENST00000385044 85 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AL591416.1-201ENST00000404015 867 ntBASIC2.03□□□□□ -2.08
RNF13O43567 MTND1P23-201ENST00000416931 372 ntBASIC2.03□□□□□ -2.08
RNF13O43567 ELOCP9-201ENST00000418624 239 ntBASIC2.03□□□□□ -2.08
RNF13O43567 RAC1P6-201ENST00000423911 575 ntBASIC2.03□□□□□ -2.08
RNF13O43567 RPS15AP9-201ENST00000439856 381 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
RNF13O43567 RPL7P36-201ENST00000444633 681 ntBASIC2.03□□□□□ -2.08
RNF13O43567 PTENP1-201ENST00000447117 1215 ntBASIC2.03□□□□□ -2.08
RNF13O43567 PSPHP1-201ENST00000450062 261 ntBASIC2.03□□□□□ -2.08
RNF13O43567 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF13O43567 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF13O43567 AC023194.1-201ENST00000493084 308 ntBASIC2.03□□□□□ -2.08
RNF13O43567 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF13O43567 AC013828.2-201ENST00000532487 235 ntBASIC2.03□□□□□ -2.08
RNF13O43567 SNORD53-201ENST00000579969 78 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AC104763.2-201ENST00000604179 382 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AC007363.1-201ENST00000604736 620 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AL355297.2-201ENST00000604792 129 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AC091965.4-201ENST00000607691 587 ntBASIC2.03□□□□□ -2.08
RNF13O43567 RNU6-91P-201ENST00000607774 107 ntBASIC2.03□□□□□ -2.08
RNF13O43567 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
RNF13O43567 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.03□□□□□ -2.08
RNF13O43567 AC243829.7-201ENST00000633081 225 ntBASIC2.03□□□□□ -2.08
RNF13O43567 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.02□□□□□ -2.09
RNF13O43567 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
RNF13O43567 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.02□□□□□ -2.09
RNF13O43567 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
RNF13O43567 SNORA67.4-201ENST00000384688 142 ntBASIC2.02□□□□□ -2.09
RNF13O43567 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.02□□□□□ -2.09
RNF13O43567 CIR1P3-201ENST00000405137 479 ntBASIC2.02□□□□□ -2.09
RNF13O43567 RPS12P24-201ENST00000412619 387 ntBASIC2.02□□□□□ -2.09
RNF13O43567 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF13O43567 EDDM3CP-201ENST00000415977 425 ntBASIC2.02□□□□□ -2.09
RNF13O43567 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF13O43567 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF13O43567 AC092648.1-201ENST00000425870 423 ntBASIC2.02□□□□□ -2.09
RNF13O43567 AL353706.1-201ENST00000436728 494 ntBASIC2.02□□□□□ -2.09
RNF13O43567 MTND4P25-201ENST00000441039 533 ntBASIC2.02□□□□□ -2.09
RNF13O43567 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RNF13O43567 AC090515.1-201ENST00000465295 476 ntBASIC2.02□□□□□ -2.09
RNF13O43567 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF13O43567 RNA5SP281-201ENST00000516504 135 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms