Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP005435.4-201ENST00000529514 284 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 ELOCP31-201ENST00000540463 467 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC006504.6-201ENST00000590142 199 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.38□□□□□ -1.87
SMAD6O43541 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC130324.3-201ENST00000614165 542 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD6O43541 AC068831.7-201ENST00000616954 363 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 MTND4LP32-201ENST00000636111 270 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 MTND5P42-201ENST00000637720 498 ntBASIC3.38□□□□□ -1.87
SMAD6O43541 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.38□□□□□ -1.87
SMAD6O43541 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.38□□□□□ -1.87
SMAD6O43541 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMAD6O43541 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
SMAD6O43541 AC073346.2-201ENST00000624724 2058 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD6O43541 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMAD6O43541 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD6O43541 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU6-552P-201ENST00000362869 119 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 U3.11-201ENST00000364476 212 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU6-522P-201ENST00000364497 107 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU4-66P-201ENST00000365199 138 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU6-903P-201ENST00000391270 109 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD6O43541 RNU2-62P-201ENST00000410868 191 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU4-78P-201ENST00000410940 126 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC126124.2-201ENST00000413542 321 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD6O43541 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 GTF2IP13-201ENST00000438487 386 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 Y_RNA.639-201ENST00000458981 102 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RPL32P34-201ENST00000486380 400 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 RNU6-559P-201ENST00000516151 98 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 AC092470.1-201ENST00000546187 132 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.37□□□□□ -1.87
SMAD6O43541 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SMAD6O43541 POLR3GP2-201ENST00000588366 668 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 SNRPGP17-201ENST00000603780 214 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AC025588.3-201ENST00000604182 274 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AL627309.6-201ENST00000606857 840 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 AL355802.3-201ENST00000607571 545 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 MIR3651-201ENST00000630427 90 ntBASIC3.37□□□□□ -1.87
SMAD6O43541 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMAD6O43541 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.37□□□□□ -1.87
SMAD6O43541 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SMAD6O43541 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMAD6O43541 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMAD6O43541 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMAD6O43541 HSPE1P11-201ENST00000339579 310 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 Y_RNA.301-201ENST00000364990 103 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 SNORD116-29-201ENST00000384516 83 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 RNU6-1160P-201ENST00000384546 104 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AL357075.1-201ENST00000404107 726 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 RNA5SP56-201ENST00000410277 118 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 MTCO2P27-201ENST00000420740 428 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.36□□□□□ -1.87
SMAD6O43541 RPL7L1P10-201ENST00000427790 463 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 MED13P1-201ENST00000428342 171 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
SMAD6O43541 AC108059.3-201ENST00000456388 214 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.36□□□□□ -1.87
SMAD6O43541 AC126389.1-201ENST00000477436 290 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC027575.1-201ENST00000481064 460 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 KLHL2P1-201ENST00000508691 521 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC005741.1-201ENST00000511094 432 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 SNORA25.17-201ENST00000517184 124 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 HMGB1P41-201ENST00000520234 440 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC011979.2-201ENST00000527568 352 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.36□□□□□ -1.87
SMAD6O43541 AC007151.1-201ENST00000572774 483 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 COX6CP3-201ENST00000580869 223 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 MIR4775-201ENST00000581168 75 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.36□□□□□ -1.87
SMAD6O43541 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
SMAD6O43541 CTHRC1P1-201ENST00000605383 469 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AL022345.1-201ENST00000607292 135 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 uc_338.15-201ENST00000615470 191 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms