Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MTND5P30-201ENST00000452896 1731 ntBASIC2.47□□□□□ -2.01
CLDN3O15551 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLDN3O15551 MTND5P6-201ENST00000422338 1798 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN3O15551 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN3O15551 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 SNORA11.2-201ENST00000408318 127 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 U3.37-201ENST00000408528 213 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN3O15551 RNU2-62P-201ENST00000410868 191 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN3O15551 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN3O15551 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN3O15551 Z98742.2-201ENST00000431564 187 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 FABP5P14-201ENST00000437273 393 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 RPL32P28-201ENST00000443577 397 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC073901.1-201ENST00000462471 408 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN3O15551 AC026801.1-201ENST00000497178 464 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN3O15551 RNU6-703P-201ENST00000516946 107 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CLDN3O15551 AC087241.2-201ENST00000535801 324 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 SNRPGP18-201ENST00000553000 214 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL354943.1-201ENST00000572103 781 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.6-201ENST00000603753 252 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.11-201ENST00000604059 253 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC091152.3-201ENST00000604227 325 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC008162.1-201ENST00000604718 254 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC007363.1-201ENST00000604736 620 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.1-201ENST00000604752 252 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.5-201ENST00000605253 252 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.12-201ENST00000605291 253 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.8-201ENST00000605353 252 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AL670379.7-201ENST00000605823 252 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN3O15551 AC005332.10-201ENST00000612725 619 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 AC010678.1-201ENST00000614118 713 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN3O15551 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN3O15551 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN3O15551 ZNF658B-202ENST00000615961 3375 ntBASIC2.46□□□□□ -2.02
CLDN3O15551 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN3O15551 RNU6-660P-201ENST00000364566 109 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN3O15551 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 PTGES3P4-201ENST00000426243 356 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN3O15551 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN3O15551 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN3O15551 RNU6-953P-201ENST00000459154 107 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN3O15551 AC072039.1-201ENST00000477611 581 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDN3O15551 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN3O15551 AC123904.2-201ENST00000548059 300 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN3O15551 MIR5571-201ENST00000577998 113 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN3O15551 AP001004.1-201ENST00000582468 324 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 MIR4999-201ENST00000585029 91 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AC245884.10-201ENST00000597355 337 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AL391813.2-201ENST00000609113 322 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 AL160394.1-201ENST00000624765 724 ntBASIC2.45□□□□□ -2.02
CLDN3O15551 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN3O15551 AC131280.1-202ENST00000624067 4211 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN3O15551 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN3O15551 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLDN3O15551 OR5H15-201ENST00000383696 930 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RNU6-809P-201ENST00000384461 107 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RNU6-14P-201ENST00000384630 106 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RPS20P2-201ENST00000402520 389 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RNU6-920P-201ENST00000410926 92 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AL109913.1-201ENST00000421173 514 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RPL22P17-201ENST00000438729 315 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC092001.1-201ENST00000453012 261 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN3O15551 SNORD97-201ENST00000459187 142 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RPL39P36-201ENST00000490784 156 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC020699.1-201ENST00000505161 445 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN3O15551 RNU6-581P-201ENST00000516214 105 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN3O15551 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN3O15551 RPS3AP4-201ENST00000555161 764 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AC026464.5-201ENST00000562497 722 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN3O15551 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.44□□□□□ -2.02
CLDN3O15551 AP000860.1-201ENST00000605250 559 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AC108747.1-201ENST00000609508 535 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms