Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A1O14983 CASP1P1-201ENST00000526345 212 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AL022154.1-201ENST00000604698 785 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC007363.1-201ENST00000604736 620 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 RN7SL853P-201ENST00000617250 223 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATP2A1O14983 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC009161.2-201ENST00000624626 138 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ATP2A1O14983 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
ATP2A1O14983 Y_RNA.41-201ENST00000362646 102 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU6-859P-201ENST00000362728 107 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU6-188P-201ENST00000364207 107 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNA5SP126-201ENST00000365092 109 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU6-946P-201ENST00000383878 107 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU6-641P-201ENST00000384006 107 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU6-456P-201ENST00000384493 107 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 MIR512-1-201ENST00000384913 84 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU2-52P-201ENST00000410680 190 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A1O14983 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC093106.2-201ENST00000428212 385 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 HMGB1P27-201ENST00000431429 603 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A1O14983 RPL23AP30-201ENST00000432419 501 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC092573.2-201ENST00000434546 243 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 Z82210.1-201ENST00000440037 231 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC117522.1-201ENST00000509821 380 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP2A1O14983 RNU4-29P-201ENST00000515943 174 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 RNA5SP291-201ENST00000517222 105 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
ATP2A1O14983 SUB1P2-201ENST00000556401 297 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.19□□□□□ -1.9
ATP2A1O14983 AL365204.3-201ENST00000612448 685 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 MIR6076-201ENST00000617521 113 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC027309.3-201ENST00000623419 351 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 MTND1P37-201ENST00000636562 264 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 AC099654.12-201ENST00000639868 649 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
ATP2A1O14983 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP2A1O14983 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP2A1O14983 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATP2A1O14983 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
ATP2A1O14983 TPTE2P4-201ENST00000258589 1605 ntBASIC3.19□□□□□ -1.9
ATP2A1O14983 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 FTLP6-201ENST00000355274 422 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 RNU6-14P-201ENST00000384630 106 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 RNA5SP38-201ENST00000410750 119 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AL451074.3-201ENST00000437709 472 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 MTND1P1-201ENST00000445453 368 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC126389.1-201ENST00000477436 290 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A1O14983 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.18□□□□□ -1.9
ATP2A1O14983 HPRT1P3-201ENST00000539521 576 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AC104763.2-201ENST00000604179 382 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AL121992.2-201ENST00000606262 256 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2A1O14983 AL049641.1-201ENST00000441055 1948 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 AC092593.1-201ENST00000515413 1815 ntBASIC3.18□□□□□ -1.9
ATP2A1O14983 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2A1O14983 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATP2A1O14983 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATP2A1O14983 AC022336.2-201ENST00000568966 2538 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 Y_RNA.3-201ENST00000362331 103 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 Y_RNA.367-201ENST00000365544 101 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 RNU6-74P-201ENST00000384235 107 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 RNU6-301P-201ENST00000384277 107 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 RNU4-55P-201ENST00000410731 137 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 AL512844.2-201ENST00000433990 593 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 AC002486.1-201ENST00000435098 391 ntBASIC3.17□□□□□ -1.9
ATP2A1O14983 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.17□□□□□ -1.9
ATP2A1O14983 AL590664.1-201ENST00000448065 339 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms