Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 AC097461.1-201ENST00000568928 2821 ntBASIC4.28□□□□□ -1.72
RFXAPO00287 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFXAPO00287 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFXAPO00287 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.27□□□□□ -1.73
RFXAPO00287 RNU6-190P-201ENST00000384154 102 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 MIR215-201ENST00000384858 110 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 SNORA3.3-201ENST00000408712 125 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 RNU2-21P-201ENST00000410368 188 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 RPL21P24-201ENST00000413752 448 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.27□□□□□ -1.73
RFXAPO00287 AL139247.1-201ENST00000422768 325 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.27□□□□□ -1.73
RFXAPO00287 RPL23AP22-201ENST00000437556 453 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 CYCSP35-201ENST00000451978 304 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AP001486.1-201ENST00000463339 476 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 AL049873.1-201ENST00000480540 376 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 RN7SL432P-201ENST00000484057 298 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AC106707.2-201ENST00000484182 374 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AC018437.1-201ENST00000492214 406 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.27□□□□□ -1.73
RFXAPO00287 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
RFXAPO00287 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.27□□□□□ -1.73
RFXAPO00287 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.27□□□□□ -1.73
RFXAPO00287 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 AC007619.2-201ENST00000605743 379 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 AC127459.3-201ENST00000624328 466 ntBASIC4.27□□□□□ -1.73
RFXAPO00287 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RFXAPO00287 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.27□□□□□ -1.73
RFXAPO00287 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFXAPO00287 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.27□□□□□ -1.73
RFXAPO00287 PRO1804-201ENST00000623780 2050 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 SNORA60-201ENST00000362396 134 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 Y_RNA.237-201ENST00000364439 102 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 Y_RNA.577-201ENST00000384794 101 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 RPS12P5-201ENST00000423449 371 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 UBE2D3P2-201ENST00000424409 445 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 NDUFB1P2-201ENST00000449477 176 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 RPL23AP31-201ENST00000456160 467 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 RPS29P2-201ENST00000479278 136 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC011005.2-201ENST00000487324 359 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 RPL30P11-201ENST00000495304 339 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC093852.1-201ENST00000503587 266 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.26□□□□□ -1.73
RFXAPO00287 SCARNA14-201ENST00000516903 136 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 RN7SKP57-201ENST00000517248 293 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.26□□□□□ -1.73
RFXAPO00287 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.26□□□□□ -1.73
RFXAPO00287 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC012119.1-201ENST00000603184 222 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AL159153.1-201ENST00000619688 317 ntBASIC4.26□□□□□ -1.73
RFXAPO00287 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
RFXAPO00287 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.26□□□□□ -1.73
RFXAPO00287 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFXAPO00287 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.26□□□□□ -1.73
RFXAPO00287 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RFXAPO00287 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.25□□□□□ -1.73
RFXAPO00287 AC116158.1-201ENST00000560231 2129 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 Y_RNA.65-201ENST00000362846 100 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RNU6-214P-201ENST00000384130 107 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFXAPO00287 LAP3P1-201ENST00000403648 294 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RNU2-25P-201ENST00000411041 191 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RNU6-293P-201ENST00000411259 106 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AL031736.2-201ENST00000426573 787 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AC115115.1-201ENST00000449927 248 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AC026784.1-201ENST00000507986 352 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 HMGN1P11-201ENST00000508668 303 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RPL23AP94-201ENST00000512518 302 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 Y_RNA.689-201ENST00000516589 107 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RNU5B-3P-201ENST00000516601 115 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 RN7SKP82-201ENST00000516786 223 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 Y_RNA.700-201ENST00000516806 100 ntBASIC4.25□□□□□ -1.73
RFXAPO00287 AC109329.1-201ENST00000518744 317 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms