Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM1O00151 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 RNU4-21P-201ENST00000362802 126 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 SNORA51.11-201ENST00000384442 131 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RNY3P10-201ENST00000384764 102 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RPL17P50-201ENST00000396131 546 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RNU2-8P-201ENST00000410727 190 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM1O00151 ELOCP4-201ENST00000420090 333 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 COTL1P1-201ENST00000422309 375 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RPL36AP53-201ENST00000432891 316 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM1O00151 TAF9P1-201ENST00000445421 515 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 TAF9P2-201ENST00000454958 515 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 SNRPGP9-201ENST00000456025 225 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM1O00151 RNU6-953P-201ENST00000459154 107 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 SUMO2P6-201ENST00000505273 288 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 AC114786.4-201ENST00000508771 728 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.49□□□□□ -2.01
PDLIM1O00151 SNORA31.3-201ENST00000516029 96 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RNU7-51P-201ENST00000516560 62 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 SNORA31.18-201ENST00000517043 134 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.49□□□□□ -2.01
PDLIM1O00151 AP003122.4-201ENST00000530980 758 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.49□□□□□ -2.01
PDLIM1O00151 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 OR5BN1P-201ENST00000532955 829 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM1O00151 AC106782.4-201ENST00000568264 210 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 Z99497.2-201ENST00000603634 310 ntBASIC2.49□□□□□ -2.01
PDLIM1O00151 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PDLIM1O00151 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
PDLIM1O00151 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM1O00151 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM1O00151 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM1O00151 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM1O00151 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PDLIM1O00151 SNORD56.2-201ENST00000363242 71 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 SNORD116-8-201ENST00000384365 95 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 RNU6-14P-201ENST00000384630 106 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM1O00151 HMGN2P38-201ENST00000423806 265 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC007283.2-201ENST00000424739 197 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AC096576.1-201ENST00000489014 359 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC090255.1-201ENST00000495779 349 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 NDUFB4P2-201ENST00000509515 391 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AC060788.1-201ENST00000521318 469 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM1O00151 MIR4635-201ENST00000583759 79 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 BNIP3P9-201ENST00000603714 553 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM1O00151 AC006386.2-201ENST00000624491 75 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 AC012005.1-201ENST00000624575 75 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM1O00151 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM1O00151 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.48□□□□□ -2.01
PDLIM1O00151 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM1O00151 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM1O00151 OR5J1P-201ENST00000313544 939 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RNU5E-1-201ENST00000362477 120 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 U3.4-201ENST00000363352 213 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RNU6-188P-201ENST00000364207 107 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RNY1P12-201ENST00000364251 105 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RNY4P34-201ENST00000364779 95 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 SMIM11P1-201ENST00000369586 178 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 SNORA40.3-201ENST00000390964 122 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM1O00151 RPLP0P7-201ENST00000416050 667 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC098614.2-201ENST00000426040 255 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC105272.1-201ENST00000438604 198 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RPS27AP8-201ENST00000452665 445 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC093899.1-201ENST00000457984 376 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM1O00151 snoU109.1-201ENST00000459339 135 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 MTCO2P29-201ENST00000465212 189 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 RPL36AP51-201ENST00000487216 318 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC105252.1-201ENST00000503089 286 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC113155.1-201ENST00000511141 769 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.47□□□□□ -2.01
PDLIM1O00151 AC079600.2-201ENST00000550076 130 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC025281.1-201ENST00000567026 265 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 AC137800.2-201ENST00000574375 120 ntBASIC2.47□□□□□ -2.01
PDLIM1O00151 ELOCP29-201ENST00000588193 334 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms